Caldicellulosiruptor kronotskyensis: Calkro_0441
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Entry
Calkro_0441 CDS
T01357
Name
(GenBank) tRNA pseudouridine synthase D TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
ckn
Caldicellulosiruptor kronotskyensis
Brite
KEGG Orthology (KO) [BR:
ckn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ckn03016
]
Calkro_0441
Enzymes [BR:
ckn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
Calkro_0441
Transfer RNA biogenesis [BR:
ckn03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Calkro_0441
Prokaryotic type
Calkro_0441
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
OMP_b-brl_2
FAD_binding_1
Motif
Other DBs
NCBI-ProteinID:
ADQ45341
UniProt:
E4SE54
LinkDB
All DBs
Position
564178..565374
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AA seq
398 aa
AA seq
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MWILKGDNSLKIKVLPEDFVVKEKLKIEIKPSGKYKIYLLAKRHWNTVDALRFISKENKI
PLEKIGCAGRKDRHALTFQYISVPREYTINFNKENVKVEFIGYSDDFVSPLILEGNFFEI
TMRKLKNKDEKILQRLNEVQQFGFPNYFDDQRFGSTQSEDEFIGEKIVKKHYNGALKLYF
TTIHPEDKKEEKERKKKISELWGDFEKILPLCKTKVERDIIKTLLKGNSRHYLIRALNLI
PKEEMSIFLSAYQSYIWNRTLSSILPYYADLLKPVKGKIMEYLIYTTLSKKSLNELKNLQ
IPTVSSKIPYVSDIVNNAILEILNERGVKTSDFDTKKIKSWYFKSFLRPAIIFPEKLEVS
SFEEDDFYEGYYKLRIKFYLPAGSFATMLIKSLTITNI
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
ttgtggattttaaagggtgataatagtttgaagattaaggttttaccagaggattttgtt
gtgaaagaaaaacttaagattgaaataaaaccatctggcaaatacaaaatttatctttta
gcaaaaaggcactggaacactgttgatgctctcaggtttatctcaaaagaaaacaagatt
ccacttgagaagattggctgtgctgggagaaaagacagacacgcactcacttttcagtat
atttctgtgccaagagaatataccataaattttaacaaagaaaatgtaaaggtagagttt
ataggatattcagatgattttgtatctcctttgattctcgaaggaaatttttttgaaata
acaatgagaaaattaaaaaataaggatgaaaaaattttacaaagactgaacgaagtacag
cagtttggttttcccaactactttgatgaccagcggtttggaagcacccaaagtgaagat
gagttcataggcgaaaagattgttaaaaaacattacaacggtgctctcaaactttatttt
acaaccattcatcctgaagataaaaaagaagaaaaggagaggaagaaaaaaatctctgag
ctttggggagatttcgaaaagatacttcctctttgtaaaacgaaggtagaaagggatatt
ataaaaactctattaaaaggcaatagcagacactatttaattagagcgctcaatcttatt
cccaaagaagaaatgtctatttttctttctgcttaccagagctatatatggaacaggact
ttaagttccattttaccttattatgctgatttactgaaacctgtaaaaggtaaaatcatg
gagtatttaatttatactacactatcgaaaaagtcattaaatgaacttaaaaatcttcaa
attccaaccgtctcatcaaaaataccatatgtgagtgatattgtaaataacgctattttg
gaaattttaaatgaaagaggagtaaagacttcggactttgatacaaagaaaattaaaagt
tggtattttaaatcatttttaagacctgccataatctttccagaaaagcttgaggtttca
agctttgaagaagatgatttttatgaagggtattataagctgaggataaaattctatctt
cctgcaggttcttttgcgaccatgcttataaagagtttaacaataacaaacatataa
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