Caldicellulosiruptor kronotskyensis: Calkro_0498
Help
Entry
Calkro_0498 CDS
T01357
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
ckn
Caldicellulosiruptor kronotskyensis
Pathway
ckn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ckn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Calkro_0498
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ckn03019
]
Calkro_0498
03110 Chaperones and folding catalysts [BR:
ckn03110
]
Calkro_0498
03029 Mitochondrial biogenesis [BR:
ckn03029
]
Calkro_0498
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ckn04147
]
Calkro_0498
Enzymes [BR:
ckn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Calkro_0498
Messenger RNA biogenesis [BR:
ckn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Calkro_0498
Chaperones and folding catalysts [BR:
ckn03110
]
Heat shock proteins
HSP60 / Chaperonin
Calkro_0498
Mitochondrial biogenesis [BR:
ckn03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Calkro_0498
Exosome [BR:
ckn04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Calkro_0498
Exosomal proteins of other body fluids (saliva and urine)
Calkro_0498
Exosomal proteins of breast cancer cells
Calkro_0498
Exosomal proteins of colorectal cancer cells
Calkro_0498
Exosomal proteins of bladder cancer cells
Calkro_0498
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
EAD9
Motif
Other DBs
NCBI-ProteinID:
ADQ45398
UniProt:
E4SEB1
LinkDB
All DBs
Position
615132..616751
Genome browser
AA seq
539 aa
AA seq
DB search
MAAKMILFDEEARRALERGVNKLADTVKVTLGPKGRNVVLEKKFGSPQIVNDGVTIAKEI
ELEDPFENMGAQIVREVASKTNDIAGDGTTTATVLAQAMIREGLKNIAAGANPMILRKGI
QKAVDVVVEEIRKMSKKVRGKEDITYVASISAGDEEIGKLVADAMEKVTNDGVITVEESK
TTETTLEIVEGMQFDRGYISAYMVTDTERMEAVLDDPYILITDKKISTIQDILPLLEQIV
QQGRKLLIIAEDVEGEALATLVVNKLRGTLQCVAVKAPGFGDRRKAMLQDIAILTGGQVI
SEELGLDLREVKLSQLGRARQVKVQKENTIIVDGAGDPSEIKARIQSIKKQIEETTSDFD
REKLQERLAKLAGGVAVIHVGAATETELKEKKLRIEDALAATKAAVEEGIVPGGGTALIN
AIPALDKLIESLTGDEKTGAMIVRKALEEPLRQIAENAGLDGSVIVNKVKESPAGVGFDA
LNERFVDMFEAGIVDPTKVTRTAIQNAASAAAMLLTTEAVVAEKPEKEKNPPAPAPDMY
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaaagatgatattatttgacgaagaggcaagaagggctttagagcgtggtgtt
aacaagcttgcagatacagttaaagtaacacttgggccaaaaggaagaaacgttgttctt
gaaaagaaatttggttcaccacagattgtaaatgacggtgttacaattgcaaaggagata
gagcttgaagacccatttgaaaacatgggtgcacagattgtaagagaggttgcatccaag
acaaacgacattgcaggtgacggtacaacaactgcaacagttctggcacaagcaatgata
agagaaggtcttaagaacattgcagctggtgcaaacccaatgatattaaggaaaggtatc
cagaaagcagttgatgttgttgtagaagaaattagaaagatgagcaagaaggtaagagga
aaagaagacatcacatatgttgcttcaatctcagcaggtgacgaagagattggcaaactt
gttgcagatgcaatggaaaaggtaacaaatgacggtgttatcactgttgaagagtcaaag
acaacagagacaactcttgagatagttgaaggtatgcagtttgacagaggttacatctct
gcatacatggtaacagatacagaaagaatggaagcggtacttgacgacccatacatcttg
attacagataagaaaatctcaacaatccaagacattctgccacttcttgaacagatagtt
cagcagggaagaaaacttttgataattgctgaagatgttgaaggtgaagcattggcaaca
ctggttgtaaacaaactcagaggtacacttcagtgcgttgcagtaaaagcaccaggattt
ggtgacagaagaaaagcaatgctccaggacattgcaatattaactggtggtcaagtaatt
tctgaagagcttggtcttgacttgagagaggtaaaactcagccagcttggtcgtgcaaga
caagtaaaagttcagaaagaaaatacaattattgttgacggtgcaggcgacccaagcgaa
atcaaggcgagaattcagtctatcaaaaagcagattgaagagacaacatctgattttgat
agagaaaaacttcaggaaagacttgcaaaacttgctggtggtgttgcagtaattcatgtt
ggtgctgcaactgagactgaacttaaagaaaagaaactcagaattgaagatgctcttgct
gcaacaaaagctgcagtagaagaaggaattgtacctggcggtggtacagctttaattaat
gcaattccagcacttgataagcttattgaaagcctcactggcgatgaaaagacaggtgca
atgattgtaagaaaagctttagaagagccactcagacaaattgctgaaaacgcaggttta
gatggttcagttattgttaacaaagtaaaagaaagcccagctggtgttggatttgatgcg
ctcaacgagagatttgttgacatgttcgaggcaggaattgttgatccgacaaaggttaca
agaacggctattcagaacgctgcatcggctgctgctatgcttctgacaacagaagcagtt
gttgctgaaaaacctgaaaaggaaaagaatccgccagctccagcacctgatatgtattaa
DBGET
integrated database retrieval system
