Caldicellulosiruptor kronotskyensis: Calkro_0876
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Entry
Calkro_0876 CDS
T01357
Name
(GenBank) phage SPO1 DNA polymerase-related protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ckn
Caldicellulosiruptor kronotskyensis
Pathway
ckn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ckn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Calkro_0876
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ckn03400
]
Calkro_0876
Enzymes [BR:
ckn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Calkro_0876
DNA repair and recombination proteins [BR:
ckn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Calkro_0876
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ADQ45748
UniProt:
E4SDD9
LinkDB
All DBs
Position
complement(1053454..1054011)
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AA seq
185 aa
AA seq
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MLTWEELESACLLCEKCPISKNRTNVVVGDGNKNAKLVFVGEAPGEEEDKQGKPFVGRAG
KFLDLALTSLELSREKDFYICNILKCRPPNNRVPTEVEAQNCLPFLRAQIKLISPKIIVC
LGATAMKYILGKDLKITQDRGKWFEKGGFWIMATYHPAALLRDPGKREDFYRDLKSVKER
LEKIK
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgcttacatgggaagagcttgaaagtgcgtgtcttttgtgcgaaaagtgccctatttcc
aaaaatcgcacaaacgttgttgtgggtgatgggaacaaaaatgcaaagcttgtgtttgtt
ggtgaagctccgggtgaagaagaagacaagcaaggcaaaccgtttgtaggaagagcagga
aagtttttggacttggctttgacttctttagagctttcaagagaaaaagatttttatatc
tgcaacattttaaagtgtagacccccaaacaaccgcgttccaacagaggtagaggcgcaa
aactgcttgccttttttgagagctcagataaaacttatctccccaaaaataattgtctgt
cttggtgcaacagctatgaaatatattcttggaaaagaccttaaaatcactcaagacagg
ggaaagtggtttgaaaaaggtggattttggattatggctacataccatccagcggcactt
ttaagagacccaggcaaaagagaggatttttacagggatttgaaaagtgtaaaggaaaga
ctggagaaaataaaatag
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