Caldicellulosiruptor kronotskyensis: Calkro_1001
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Entry
Calkro_1001 CDS
T01357
Name
(GenBank) cysteine desulfurase NifS
KO
K04487
cysteine desulfurase [EC:
2.8.1.7
]
Organism
ckn
Caldicellulosiruptor kronotskyensis
Pathway
ckn00730
Thiamine metabolism
ckn01100
Metabolic pathways
ckn01240
Biosynthesis of cofactors
ckn04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
ckn00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
Calkro_1001
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
Calkro_1001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ckn03016
]
Calkro_1001
03029 Mitochondrial biogenesis [BR:
ckn03029
]
Calkro_1001
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
ckn02048
]
Calkro_1001
Enzymes [BR:
ckn01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
Calkro_1001
Transfer RNA biogenesis [BR:
ckn03016
]
Eukaryotic type
tRNA modification factors
Thiolation factors
Calkro_1001
Prokaryotic type
Calkro_1001
Mitochondrial biogenesis [BR:
ckn03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Proteins involved in Fe-S cluster biogenesis
Calkro_1001
Prokaryotic defense system [BR:
ckn02048
]
DNA phosphothiolation system
Sulfur modification proteins
Calkro_1001
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_5
DegT_DnrJ_EryC1
Beta_elim_lyase
Cys_Met_Meta_PP
Pyridoxal_deC
Motif
Other DBs
NCBI-ProteinID:
ADQ45872
UniProt:
E4SB90
LinkDB
All DBs
Position
1161841..1163025
Genome browser
AA seq
394 aa
AA seq
DB search
MEGKIIYFDHAATTPLKKEVLDEMMPYLTDQYGNPSTIYKLGREAKKAVELARERVAKAL
NADIQEIYFTSGGTESDNWALKGVAFANKDKGKHIITTTIEHHAVLHPLKYLESLGFEVT
YVPVEPNGIVDPHRIKEAIRNDTILISVMLANNEIGTIQPVKEIAKIAKEKGIIVHTDAV
QAVGQIPVDVKDLGVDLLSLSAHKFYGPKGVGALYIRKGTKIHPFSHGGAQERNRRAGTE
NVAGIVGLGKAIELATQNLSEYAAKLQKLRDKLIDGVLSKIDYVRLNGDRHQRLPNNANF
SFEFIEGESLLLMLDMKGIAASSGSACTSGSLDPSHVLLAIGLEHEVAHGSLRITLGEDN
TEEDIDYLLEVLPEIVSRLREMSPLYESVKKGGN
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atggaaggaaagattatttattttgaccatgcagccacaacccctcttaaaaaggaagta
ttagatgaaatgatgccttatttgacagatcagtacggcaatccttcaacaatttacaag
cttggaagagaagcaaaaaaagcagttgaacttgcaagagaaagagttgcaaaggcctta
aatgctgatattcaagaaatttactttacctccggtggaacagaatcagataactgggca
ttaaaaggagttgcttttgcaaataaagataaaggcaagcatattataacaacaacaatc
gagcaccatgcggttttgcatcctctgaaatatcttgaaagcttaggatttgaagtcaca
tatgttcctgttgagccaaatggcattgttgaccctcacagaataaaagaagcaataaga
aatgacactattttgatttctgtcatgcttgcaaataacgaaattgggacaatccagcct
gtcaaagagatagcaaagatagcaaaggaaaagggaataattgttcatacagatgctgtt
caagcagttgggcaaattcctgttgatgtaaaagatttaggtgtagaccttttatcactt
tctgctcataaattctatgggccaaaaggtgttggtgcactttatatcagaaaagggaca
aagattcatccattttcgcatggaggtgcacaggagagaaataggcgtgctggaacagag
aatgtagcaggaattgttggccttggcaaggctatagagcttgcaactcagaatctttct
gagtatgccgcaaagcttcaaaaactgagagataagctcattgacggggtcttaagcaaa
attgattatgttcgactaaatggtgatagacatcagagacttcctaacaatgcaaacttc
tcatttgagtttatagaaggtgaaagcctgcttttgatgcttgacatgaaaggaattgca
gcttcaagcgggtcagcatgtacatcagggtctttggacccttcacatgtgcttctggca
attgggcttgaacacgaggttgctcatgggtctttgagaataacacttggtgaagataac
accgaagaagatatagattatctattagaagttttgcctgaaattgtttcaagattaaga
gaaatgagtccactttatgaaagcgtaaaaaaagggggtaattga
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