Caldicellulosiruptor kronotskyensis: Calkro_1030
Help
Entry
Calkro_1030 CDS
T01357
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
ckn
Caldicellulosiruptor kronotskyensis
Brite
KEGG Orthology (KO) [BR:
ckn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ckn03016
]
Calkro_1030
Enzymes [BR:
ckn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
Calkro_1030
Transfer RNA biogenesis [BR:
ckn03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Calkro_1030
Prokaryotic type
Calkro_1030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
RE_HaeIII
DUF2344
Motif
Other DBs
NCBI-ProteinID:
ADQ45901
UniProt:
E4SBB9
LinkDB
All DBs
Position
1191900..1192634
Genome browser
AA seq
244 aa
AA seq
DB search
MRNILLTIEYDGTGYFGWQKQPNKKTIQGTIEEAIKKLTGEEVNLIGSGRTDRGVHALNQ
KANFKTSSKIPTDKFPLALNSVLPGDISIKDAIEVPLDFSARYSARQKTYKYLIYNKKSR
PALLRNYAYYYPYQLDVDAMQRTCEYFIGEYDFKSFCSADSEAKTTIRRVYNAYLTFENE
CIAIYITANGFLYNMARIIAGTILDVGAGKLKPMDIPLIIESKDRTKAGKTLPPWGLYLV
DVVY
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
ttgagaaatattctcttgaccatagaatatgatggcacaggatattttgggtggcaaaaa
cagccaaataaaaaaactattcagggaacaattgaagaagctataaaaaagttgacaggc
gaagaggtaaacttgattggttctggaagaacagacagaggtgttcatgctttaaatcaa
aaagctaatttcaaaacaagcagcaaaattccaacagacaagtttccgcttgccttaaat
tctgtcctgcctggcgatatatctataaaagacgcaattgaggtgcctttagatttttct
gcgcgatacagtgcaaggcagaagacttataagtatcttatttataacaaaaaaagccgt
cctgcgcttttgagaaactatgcgtattattatccataccagcttgatgttgatgccatg
caaagaacatgtgaatactttataggggagtatgactttaaaagtttttgttctgctgat
tctgaagcaaagacaaccataaggcgtgtatacaatgcatatttgacctttgaaaatgag
tgcattgcaatatatataacagccaatggctttctttacaacatggcaaggattatcgca
ggaacaatcttggatgtgggagcaggaaaattaaaaccaatggatattccgcttataata
gaaagcaaagacagaacaaaggcaggaaagaccttgccaccatgggggctttaccttgtt
gatgttgtttactga
DBGET
integrated database retrieval system
