KEGG   Caldicellulosiruptor kronotskyensis: Calkro_1050
Entry
Calkro_1050       CDS       T01357                                 
Name
(GenBank) DEAD/DEAH box helicase domain protein
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
ckn  Caldicellulosiruptor kronotskyensis
Brite
KEGG Orthology (KO) [BR:ckn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ckn03400]
    Calkro_1050
Enzymes [BR:ckn01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Calkro_1050
    5.6.2.6  RNA 3'-5' helicase
     Calkro_1050
DNA repair and recombination proteins [BR:ckn03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    Calkro_1050
SSDB
Motif
Pfam: DEAD Helicase_C ResIII Cas3-like_C_2 Helicase_C_2 DEXQc_Suv3
Other DBs
NCBI-ProteinID: ADQ45921
UniProt: E4SCI7
LinkDB
Position
1207884..1209977
AA seq 697 aa
MDNGYLEDLNIKNQLSSTWDMFFGSYGRLKDVQRKAIPKILEGKDILICSPTASGKTEAA
CAPLIERLKSRFKVWTILYICPTRALVNDIYERLISRLIYYDINILRKTGDYQAEFKTIP
NILITTPESFDSMMCRGKLKNGFGHILSCVYAVILDEVHLLYGSSRGEQVRWLLERLRRL
KAQAFKEKWCDDEKIQIIGMSATMKEPEKILKYYIPDGEIIKAEGKREINLISDEIVSID
ETIFKYFCSIDFQNRFKKILIFCNSRNKVDALVAELRSILKDSNYQIVSHHGSLAKSERE
ETEEILKRHERVIAVSSSTFEIGIDIGSIDLVVLAEPPLDMNSFLQRIGRGNRKNERIEV
LLCAENDTQRLIQKAMLLCAQNGILLNTAVGNIFHVIIQQIISYIFQSKDFKRSKDALKS
LIESCLKYYFEDLSVANDIINNLILSSQLKEADDGKLTVKNDWFDKFSNGQIHSTIRFAS
GMSIYDLEKNKVLATNVQDFQNKRIKITGQNKEIIDIQGNSLIVKNSSEKLDGGLLSYAP
YETIFFNTQPYAIRTYLGLEDKVFPYIIRDNMVYVFHLGSTQREFFIKLLIRMLDLKAIE
AVNPFLVQFNKSYCNKVISSLKDLNYYSMIEFIEKDIEWIEKALKINPHNKLLPMKIRLK
EIVRIINLENEIKLFKKAEFQNVTHTQLEMYLAKLIH
NT seq 2094 nt   +upstreamnt  +downstreamnt
atggataatggctatttagaagatctaaatattaagaatcagctttcttcaacatgggat
atgttttttggaagctatggtagactaaaagatgttcaaagaaaggcaattcccaaaata
cttgagggaaaagatattttaatatgctcacctactgcaagtggcaaaacagaagctgca
tgtgcacccttgattgagaggttaaagtcaaggttcaaggtctggacaattttatacatt
tgtccaacaagagcactagttaacgatatctatgaaaggcttatttcacggcttatctat
tatgatattaatattttaagaaaaacaggggattatcaagccgaatttaaaacaattccg
aatatactaattacaacaccagagtcatttgacagtatgatgtgtagaggaaaacttaaa
aatggttttgggcatattttatcttgtgtttatgcggttattttagatgaggtgcatctt
ttatatggtagctcaagaggtgagcaagtaagatggctacttgaaaggttaagaaggcta
aaagctcaagcttttaaagaaaagtggtgtgatgatgaaaagattcagattattggaatg
agtgcaacaatgaaggaacctgaaaagatattaaagtattatattcctgatggtgaaata
ataaaagctgaagggaaaagagaaataaatctaatatcagatgaaattgtttcaattgat
gagacaatattcaagtatttttgcagcattgattttcaaaacaggtttaagaaaattcta
attttttgtaattcaagaaataaagttgatgctttagtagcagagctcagaagtatttta
aaagattcaaactaccaaattgtatctcatcatggcagtttagcaaagtctgaaagagaa
gaaactgaagaaattttaaaaaggcatgaaagggttatagcagtttcatcttctaccttt
gaaataggaattgatattggctcaattgatttggttgttttggcagaaccgccgcttgat
atgaatagctttcttcaaagaattgggcgtgggaacagaaaaaatgagagaatagaggtc
cttttatgtgctgaaaatgatactcaaagactaattcaaaaagctatgctcctttgtgca
caaaatggaattcttttaaatacagcagtggggaatatttttcatgttattatccagcag
ataatctcatacatatttcagtcaaaagattttaaacgaagcaaagatgcactaaaaagc
ttaatagaatcttgtttaaaatattattttgaagacttatcagttgcaaatgacattata
aacaatctaattttaagcagccagctcaaagaagcggatgatggcaagctaactgtaaag
aatgattggtttgataagttttcaaacggacaaattcattcaacaattagatttgcaagc
ggaatgtcaatttatgatcttgaaaagaataaggttttagcaacaaatgtccaagatttt
caaaacaaaaggattaaaattacaggtcaaaacaaagagataatagatattcaaggaaac
agtttaattgtgaaaaattcatctgagaagttagatggtggtcttttaagttatgcacca
tatgaaactatattttttaatacgcagccttatgcaataaggacatatttgggattagaa
gataaagtttttccttatattattagagataatatggtttatgtctttcatttaggatca
acacaaagggagttttttataaagttattaataaggatgttagatttaaaggctattgaa
gctgttaatccgtttttagtgcaatttaataaaagttattgtaataaagttatttcatct
ttgaaagatctaaactattattcaatgattgaatttatagaaaaagatattgaatggata
gaaaaagctttaaaaatcaatcctcacaacaaactgcttccaatgaaaatcaggctaaaa
gaaatagttaggattataaatttggaaaatgaaataaaactatttaaaaaagctgaattt
caaaatgtcactcatacacaattagaaatgtaccttgcaaaattaatacattaa

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