Caldicellulosiruptor kronotskyensis: Calkro_1269
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Entry
Calkro_1269 CDS
T01357
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ckn
Caldicellulosiruptor kronotskyensis
Pathway
ckn03030
DNA replication
ckn03410
Base excision repair
ckn03420
Nucleotide excision repair
ckn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ckn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Calkro_1269
03410 Base excision repair
Calkro_1269
03420 Nucleotide excision repair
Calkro_1269
03440 Homologous recombination
Calkro_1269
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ckn03032
]
Calkro_1269
03400 DNA repair and recombination proteins [BR:
ckn03400
]
Calkro_1269
Enzymes [BR:
ckn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Calkro_1269
DNA replication proteins [BR:
ckn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Calkro_1269
DNA repair and recombination proteins [BR:
ckn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Calkro_1269
NER (nucleotide excision repair)
GGR (global genome repair) factors
Calkro_1269
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
HHH_5
NYN_YacP
Motif
Other DBs
NCBI-ProteinID:
ADQ46130
UniProt:
E4SBK7
LinkDB
All DBs
Position
1442444..1444996
Genome browser
AA seq
850 aa
AA seq
DB search
MKLVIFDGNSILYRAFFALPELTTSNNIPTNAIYGFVNVILKYLEQEKPDYVAVAFDKKG
REARKSEYQEYKANRKPMPDNLQVQIPYVREILYAFNIPIIEFEGYEADDVIGSLVNQFK
NTGLDIVIITGDRDTLQLLDKNVVVKIVSTKFDRTMEDLYTIENIKEKYGVWANQVPDYK
ALVGDQSDNIPGVKGIGEKSAQKLLEEYSSLEEIYQNLDKIKSSIREKLEAGKDMAFLSK
RLATIVCDLPLNVKLEDLRTKEWNKERLYEILVQLEFKSIIKRLGLSEVVQFEFVQQRTD
IPDVEQKELESISQIRSKEIPLMFVQGEKCFYLYDQESNTVFVTSNKLLIEEILKSDTVK
IVYDLKNIFHQLNLEDTNNIKNCEDVMIASYVLDSTRSSYELETLFVSYLNTEIEAVRKD
KKIVSVVLLKRLWDELLRLIDLNSCQFLYENIERPLIPVLYEMEKTGFKVDRDALIQYTK
EIENKILKLETQIYQIAGEWFNINSPKQLSYILFEKLKLPVIKKTKTGYSTDAEVLEELF
DKHEIVPLILDYRMYTKILTTYCQGLLQAINPSSGRVHTTFIQTGTATGRLASSDPNLQN
IPVKYDEGKLIRKVFVPEGGHVLIDADYSQIELRILAHISEDERLISAFKNNVDIHSQTA
AEVFGVDIADVTPEMRSQAKAVNFGIVYGISDYGLARDIKISRKEAAEFINRYFERYPKV
KEYIDNTVKFARDNGFVLTLFNRKRYIKDIKSTNRNLRGYAERIAMNSPIQGSAADIMKL
AMIKVYQKLKENNLKSKIILQVHDELLIEAPYEEKDIVKEIVKREMENAVTLKVPLVVEV
KEGLNWYETK
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atgaaactggttatattcgatggaaacagcattttgtacagagccttttttgctcttcct
gaactgacaacctcaaataatattccaacaaacgctatttatggatttgtaaatgtgata
ttgaaatatttagaacaagaaaaacctgattatgttgctgtagcatttgataaaaaagga
agagaggcacgaaaaagtgaataccaagaatacaaagcaaacagaaaacctatgccagat
aaccttcaagtacaaatcccttatgttcgagagattctttatgcctttaacattccaata
attgagtttgaaggatatgaagcagatgatgtaatcggctcacttgttaaccagttcaaa
aatactggtttggatattgttattattacgggtgatagggatactcttcaattacttgac
aaaaacgtagttgtaaaaattgtttcaaccaagtttgacagaacaatggaagatttgtac
accattgaaaacataaaagaaaaatatggggtttgggcaaatcaagtgcctgattacaaa
gcgcttgttggagaccaatcagataacattcccggggtaaagggaattggcgaaaagagt
gcccagaagctcttggaagagtactcatccttagaagagatataccaaaatttagataaa
attaaaagttccattcgtgaaaagttagaggcaggaaaagatatggcgtttttatccaag
cgcttagcaacaattgtatgtgatttaccactaaatgttaaacttgaagacctaagaaca
aaagagtggaacaaggaaaggctctatgagattttggtgcagttagagttcaaaagcata
ataaaacggttaggactatcagaagttgttcaatttgaatttgttcagcagcgaaccgat
atacctgacgttgaacaaaaagagcttgaaagtatttcacaaataagatcaaaagagatt
ccattaatgtttgtccagggcgaaaaatgtttttatttatatgatcaagaaagtaatact
gtatttgtaacaagtaataaacttttgatagaggagattttaaaaagtgacactgtgaaa
attgtgtatgatttgaaaaatatatttcatcaactcaacctggaagacactaataatatt
aaaaattgcgaagatgtaatgattgcttcctatgttcttgacagcacaagaagttcatat
gagttagaaacgttgtttgtatcttacttgaacactgagatagaagctgtaagaaaagac
aagaaaatagtctctgtggtacttctaaaacggttatgggacgagcttttaagattaata
gatttaaattcatgccagtttttatatgagaatatagaaagacctcttatcccagttcta
tatgaaatggaaaaaacaggatttaaggtggatagagatgcccttatccagtataccaaa
gagattgaaaacaaaatattaaaacttgaaacgcagatataccagattgcaggtgagtgg
tttaacataaattcaccgaaacagctttcttacattttgtttgaaaagctaaaacttcct
gtaataaagaagacaaaaacaggatattccactgatgccgaggttttagaagagcttttt
gacaaacatgaaatagttcctcttattttggattacaggatgtatacaaagatactgaca
acttactgtcagggattactacaggcaataaatccttcttcgggtagagttcatacaacc
tttatccaaacaggtacagccacaggaagacttgcaagcagcgatcctaatttacaaaat
atacctgtaaaatatgatgaggggaaattgatacgaaaggtttttgtacctgaaggtgga
catgtactgattgatgcagattattcccaaattgaactgagaatacttgcccatatttct
gaagatgaaagacttataagtgctttcaaaaataatgttgacattcattctcagacagca
gctgaggtttttggtgtagacatagccgatgttactccagagatgagaagtcaagctaaa
gcagtaaattttggtatagtttatgggatttctgattatggtcttgcaagggatattaaa
atttccaggaaagaagctgcagagtttataaacaggtattttgagcgttatcccaaagtt
aaagagtatatagataatactgttaagtttgctcgtgataatggatttgttttgacttta
tttaatagaaagagatatataaaagacataaaatctacaaacagaaacttgaggggttat
gcagaaaggattgcaatgaattcgccaattcagggcagtgctgctgatatcatgaaattg
gcaatgattaaggtttatcagaaacttaaagaaaacaatctcaaatcaaaaataattttg
caggtacacgatgagcttttaattgaagccccatacgaagaaaaggatatagtaaaggaa
atagtaaaaagagaaatggaaaatgcggtaactttaaaagtacctttggtagttgaagta
aaagaaggactgaactggtatgagacaaaatag
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