Caldicellulosiruptor kronotskyensis: Calkro_1480
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Entry
Calkro_1480 CDS
T01357
Name
(GenBank) pseudouridine synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
ckn
Caldicellulosiruptor kronotskyensis
Brite
KEGG Orthology (KO) [BR:
ckn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ckn03009
]
Calkro_1480
Enzymes [BR:
ckn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
Calkro_1480
Ribosome biogenesis [BR:
ckn03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
Calkro_1480
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SYY_C-terminal
S4_2
TruB_N
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-ProteinID:
ADQ46336
UniProt:
E4SCA1
LinkDB
All DBs
Position
complement(1651780..1652481)
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AA seq
233 aa
AA seq
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MRLDKFLTHCGFGSRSQVKKLIREGIVTVNGKQIVEVDFKINPEEDIVEVDGRVVKFSKQ
IYIMMNKPKGYVCSNEELASLTVFSLISDDLKYRDLHTVGRLDKDAEGLLIITDDGEYTH
RVISPKKRIEKEYLVRLEKEVDEEKLKEFENGIILDDGYKTLPAKYTIIDSTTVKLCIYE
GKYHQVKRMFEAIGNKVVDLKRLRIGGLNLDQSLKPGEYRVMKEEEAYLVFGK
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgaggcttgacaagtttctgactcactgtggttttggttcacgaagtcaggttaaaaag
ttaataagagaaggaattgtgactgtaaatgggaaacaaatagttgaagttgattttaag
attaatcctgaagaagatatagtcgaagttgatggcagagttgtaaagttcagtaaacag
atttatatcatgatgaacaaaccgaaaggttatgtgtgctcaaatgaagagctggcatca
cttacagtgttttcacttatttctgatgatttaaagtatcgagatttgcatacagttgga
agacttgacaaagacgcagaaggtcttttgataattacagatgatggtgaatatacgcac
agagttatctcacccaaaaaaagaattgaaaaagagtatttagtaaggcttgaaaaagag
gtggatgaggaaaagctgaaagagtttgaaaatggtattatcttagatgatggttataag
acacttcctgcaaaatatactattattgatagtaccacagtcaaattgtgtatatatgaa
ggtaaatatcatcaagttaaaaggatgttcgaagcaattggaaataaggtggtggaccta
aaacgtctgagaataggaggtcttaatttagaccaaagtttaaaaccgggtgaatacagg
gtgatgaaagaagaagaggcttatttggtgtttggtaagtaa
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