Caldicellulosiruptor kronotskyensis: Calkro_1554
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Entry
Calkro_1554 CDS
T01357
Name
(GenBank) SMC domain protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
ckn
Caldicellulosiruptor kronotskyensis
Brite
KEGG Orthology (KO) [BR:
ckn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ckn03400
]
Calkro_1554
DNA repair and recombination proteins [BR:
ckn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Calkro_1554
Archaeal homologous recombinant proteins
Calkro_1554
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_15
SbcC_Walker_B
AAA_21
AAA_29
GAS
AAA_27
AAA
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
ADQ46409
UniProt:
E4SF84
LinkDB
All DBs
Position
complement(1720081..1722654)
Genome browser
AA seq
857 aa
AA seq
DB search
MKPLFLRIENFKSYKDSQNEIDFSNIKVACIIGKNGNGKSSIAEAIAWALFGEFERLQTG
KRGKVAETEYINSHSDYMQVEFEFELNKTIYKVVRRLDRRGKKYLSLFVRKADSLIPINE
ATNTQTQEKLQNILGIDFNVFLHSTYLSQKRTEDFLLSSPEDRREVLAKILNLSIYDRIN
ELAKEKRREIKVLLDIKNREIEEENKILSEEESIKSLVADLEKKRTAIEAELNGLRNELN
ALISKKSEIEQKLSLLSQKKSEMIEHQRKAEEIRYRIETARKELLKIEEKLNEEDKITAM
VKEYEMVKEKVELKRKDYETYLELKNKIVLCERDIKNKLDQKRIFEKSIEESNLQLNNET
SEISKYEEEIKKVEIEISKVENELEKVKQYKHEQEKKRDEIVKHEKLLEVVENKLKELAS
SYRLIEANQGRCPVCLRQINGQEEKEHIKSEIAAQGREFKQRRESLIKKLEILKKEFSEL
EEKIKLEEVLRAREKKLHGMFENLKAKVGQKTQNIVNLQNSVIQVTQTIKLCEDEIERLK
EEMTNLKREISILNFDENYYIQLLQREKELEIYQSLFNELTINKVKAENLKKEILEYQEQ
EKEILKKVEDLKQEIANISTIAHTAMLEKVKSDILSCESKIRNLQESLNSVLKELGILEQ
KLNQIEEAKKKLLRLESEIEEMKKKIEIYDIIIDITGPDGIKNEIIANTLPQIRDEANGL
LKILTNGAFSIDFKTQKETASGKTIETLQIEISDANGTRNYELFSGGELFRINFAIRIAL
SKVLLKRAGASIRMLILDEGFGSQDEEGKDHIVECLNRIKDQFDTILVITHIEDLMDAFD
QRIIVKKDVEGSKIFVV
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
ttgaaacctctttttttaaggattgaaaatttcaaatcatacaaggatagtcagaacgag
attgattttagtaatataaaagttgcttgtatcatagggaagaatggaaatggaaaatct
tctattgctgaagcaattgcctgggcactttttggtgagtttgaaagacttcaaacagga
aaacgtggaaaagttgcagaaacagagtatataaactcacatagtgattatatgcaggtt
gaatttgaatttgaattgaataagaccatatataaagttgtgagaagacttgatagaaga
ggtaaaaagtacctttcactttttgttagaaaagcagacagcctcatacctataaatgaa
gcaactaacacccaaactcaagaaaagcttcagaatattttaggaatagattttaatgtc
tttttgcattcaacatatctttctcaaaagagaacagaagattttttgctgtcttcgcca
gaggacagacgtgaagtgcttgcaaagatattgaacctgagcatatatgacaggataaac
gaacttgcgaaagaaaaacgaagagaaataaaagttttgctggatataaagaacagagaa
atagaggaagaaaataagattttgtcagaggaagagtctataaaatctttggtggctgat
ttggaaaagaagagaacagcaattgaagctgaattaaatggtttgagaaatgaactaaat
gcccttatttcaaaaaagtctgaaatagaacaaaaacttagtttattgagtcagaaaaag
agtgaaatgatagaacatcagagaaaagctgaggagataaggtataggattgaaactgcc
agaaaagagcttttaaaaattgaagaaaagttaaatgaagaagataaaataactgcaatg
gttaaagagtatgagatggtaaaagaaaaggttgaactcaagagaaaagattatgaaacg
tatcttgagctcaaaaataaaatagttctgtgtgagagggacataaaaaacaaactggat
cagaaaagaatatttgaaaagagtattgaagaaagtaatttacaacttaataatgaaact
tctgagatttcaaagtatgaagaagagataaaaaaagtagagattgaaatttcaaaggtc
gaaaatgagctggaaaaagtaaaacagtataaacatgaacaagagaaaaaaagagatgag
attgtaaaacatgaaaagttgttagaagtggtggagaacaaattaaaagagcttgcttca
agttacaggctcatagaagcaaatcagggaaggtgcccagtatgcttgcgtcaaattaat
ggccaggaagaaaaagagcatataaagagtgaaattgcagcccagggtagggaatttaaa
caaagaagagaaagtttgataaaaaaacttgaaattttgaaaaaagagttttctgagctt
gaagagaagataaaacttgaagaggttcttcgggcaagagaaaaaaagcttcacgggatg
tttgaaaacttgaaggctaaggtggggcagaaaacacaaaacattgttaatctacaaaat
tcagtaattcaggtgacccaaactataaagctttgtgaagatgagatagaaaggttaaaa
gaagagatgacaaacctaaaaagagaaatttccattttaaactttgatgagaattactac
atccagcttttgcaaagagaaaaagaacttgaaatatatcaaagcctatttaatgagctt
actataaacaaggtcaaagctgagaatttaaaaaaggagatacttgagtatcaagaacag
gaaaaagagattttgaaaaaggttgaggatttaaagcaggagatagcaaatatatctact
attgcacatactgcaatgcttgaaaaagtaaagtcagatattctaagctgtgaaagtaaa
ataagaaatcttcaagaaagtcttaattctgttttaaaggaattgggaatccttgagcag
aaactaaatcagattgaagaggcaaaaaagaagttattgaggcttgagagtgaaatagag
gagatgaaaaaaaagattgaaatatacgacataataatagatatcacaggaccagatgga
ataaaaaatgagattattgcgaatacgctgccacagataagagatgaagcaaatggactt
ttaaaaatactaacaaacggagcattttcaatagattttaaaacccaaaaagaaacagca
tctggaaaaacaatagaaactctccagatagaaatttctgatgcaaacggtacaagaaac
tatgagcttttttctggaggagagcttttcaggataaattttgctatcagaattgctctt
tcaaaggtacttctcaaaagagcaggtgcttcaatcagaatgctaattttagacgaaggt
tttggttctcaagatgaagagggaaaagaccacattgttgaatgtttgaatagaattaaa
gaccaatttgacactatacttgttataacccacattgaggacttaatggatgcatttgac
caacggattattgttaaaaaagatgtggaagggtctaaaatttttgttgtataa
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