Caldicellulosiruptor kronotskyensis: Calkro_1555
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Entry
Calkro_1555 CDS
T01357
Name
(GenBank) nuclease SbcCD, D subunit
KO
K03547
DNA repair protein SbcD/Mre11
Organism
ckn
Caldicellulosiruptor kronotskyensis
Brite
KEGG Orthology (KO) [BR:
ckn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ckn03400
]
Calkro_1555
DNA repair and recombination proteins [BR:
ckn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Calkro_1555
Archaeal homologous recombinant proteins
Calkro_1555
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Gene cluster
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Motif
Pfam:
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
ADQ46410
UniProt:
E4SF85
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Position
complement(1722682..1723944)
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AA seq
420 aa
AA seq
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MAIRGVHTADLHFGVTTYSRETPDGLGSRVHDFFKTFDRILQFIRDNSIDFLLITGDIFK
DREPNSTLRNMFYKRIVDISKEGVLVIIIPGNHDMHPFETKDHSVKVFEIFEQPNIVVMD
KPFEVKEFEIRDEKLRIIAVPYLYLERFVDETFPQKTEELDMIAANFFEKKLSQVLDSSE
DNIPTILAGHFTVVEAQIGSERSIMLGKDIKVPLSCLLNPKLKFVALGHIHKPQILHAAN
PTVLYCGSPDRIDFSEANDSKGFVVFELDKDSFRFEFQPVKVRPFCQLEIDVFEDQVENL
TKKILDKIEEKIQIFEQNTSSSIQVSVVKLIIKTQSLIKEKIDIGLVERFLRDRCFVLAP
IEIEVIDSKKDFRIAEVDEKSDPVEAFEKFLSASQKYRDVENKDKIVSEFKKLLHEIQEK
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggcaattagaggagttcatacagctgaccttcatttcggagtgacaacttatagccgc
gaaactccagacggacttggctcacgtgtacatgactttttcaaaacatttgacagaata
ttgcagtttataagagataacagcattgactttttgcttataacaggcgatatttttaaa
gacagggaaccaaactctacgctgaggaatatgttttacaagaggattgtggatatttcg
aaagaaggtgttttggtcattataattccaggcaatcatgatatgcatccatttgagaca
aaagaccattctgtaaaggtctttgagatatttgaacagccaaacattgttgtaatggac
aaaccttttgaagtcaaagaatttgaaataagagatgaaaagcttcgcattatagctgtg
ccatacctttatcttgaaaggtttgtggatgagacatttcctcaaaagacagaagagctt
gatatgatagcagccaatttttttgagaaaaaactaagccaggttttagactcttcagaa
gataatattccaacaatacttgctgggcactttactgtagtagaggcgcagattggaagc
gaaagatcaattatgcttggcaaagacataaaagtgcctctttcatgccttttaaatcca
aagttaaaatttgtggcccttggacacattcacaagcctcagattttacatgcagcaaac
cctactgtgctgtattgtgggtcgcctgatagaatagatttttctgaagcaaacgacagc
aaggggtttgttgtgtttgaattagataaagatagctttaggtttgagtttcaacctgtt
aaggtaagacctttttgccagttggagattgatgtgtttgaagaccaagtagaaaatctc
accaaaaagattcttgacaaaatagaagagaaaatacaaatttttgagcaaaatacttca
agtagtattcaggtttcggttgtaaagctcataataaaaactcagagtttgataaaagag
aagattgacattgggcttgttgaaaggtttttgagagacagatgttttgttttagcgcct
atcgaaattgaggtaattgactcaaagaaagattttagaattgctgaggttgatgaaaag
tcggaccctgttgaggcattcgaaaagtttttatctgcaagccagaaatacagggatgta
gaaaataaagataagattgtatcagaatttaaaaaacttctacatgaaatccaagaaaaa
taa
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