Caldicellulosiruptor kronotskyensis: Calkro_1640
Help
Entry
Calkro_1640 CDS
T01357
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ckn
Caldicellulosiruptor kronotskyensis
Brite
KEGG Orthology (KO) [BR:
ckn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ckn03016
]
Calkro_1640
Enzymes [BR:
ckn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Calkro_1640
Transfer RNA biogenesis [BR:
ckn03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Calkro_1640
Prokaryotic type
Calkro_1640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DUF5854
DKCLD
Motif
Other DBs
NCBI-ProteinID:
ADQ46492
UniProt:
E4SFG7
LinkDB
All DBs
Position
complement(1807291..1808163)
Genome browser
AA seq
290 aa
AA seq
DB search
MNGVLLVDKPVGITSHDVVEFVRKVFSVKAGHAGTLDPFATGLLVILLGEATKLSSYFTS
QEKTYIATMQFGIRTDTLDITGKIKEKNNMIVEEKEIEECFKNLKGEIELDVPIFSAKKL
RGKKLYEYARKGINIEIPKVKSIIYNIEIINFSYPYLEFKVQCSHGTYIRSLAEKIAESL
STVGLLSELRRIKSGFFDLKDAVALTDIREKSIIPVYRLFKNEIKVGRKAYKKILNGNLL
VPQDIEDIIEIDTAFADFYKIWDDKVVFIYKRERDVFKYILKVETADECL
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgaatggagttttacttgttgacaaaccagtaggtattacctcacatgatgttgttgaa
tttgtcaggaaagttttcagtgtgaaagctgggcatgcaggaacacttgacccttttgca
actgggcttttggtcattttgctgggggaggctacaaagctttcttcttactttacaagt
caagaaaagacatatatagcaacaatgcaatttggtataaggaccgatacacttgatata
actggtaaaatcaaagaaaagaataatatgattgttgaagaaaaagagatagaagaatgt
tttaaaaatttaaaaggagaaattgagcttgatgttccaattttttctgcaaaaaagttg
agaggtaaaaaactctatgagtatgcacgaaaaggaataaatattgaaattccaaaggtg
aagagtatcatatataatatagagataatcaacttttcatatccgtatcttgaatttaaa
gttcagtgcagccacggaacgtatattagaagtttggcagaaaagattgcagaaagtctt
tcgactgtaggtctgctttctgagctaagaaggataaaaagcggtttttttgatttgaaa
gatgcagttgctttgaccgatatcagggaaaaaagtataattcctgtgtacaggctattt
aaaaatgagataaaagtaggcagaaaagcatataagaagattttaaatggaaatctactt
gtgccccaggacatagaagatattatagagattgacactgcatttgcagacttttataaa
atttgggatgataaggttgtctttatatacaaaagagaaagggatgtattcaaatatatt
ttaaaggtggaaactgcagatgaatgtttatga
DBGET
integrated database retrieval system
