Caldicellulosiruptor kronotskyensis: Calkro_1645
Help
Entry
Calkro_1645 CDS
T01357
Name
(GenBank) NusA antitermination factor
KO
K02600
transcription termination/antitermination protein NusA
Organism
ckn
Caldicellulosiruptor kronotskyensis
Brite
KEGG Orthology (KO) [BR:
ckn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ckn03021
]
Calkro_1645
03009 Ribosome biogenesis [BR:
ckn03009
]
Calkro_1645
Transcription machinery [BR:
ckn03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
Calkro_1645
Ribosome biogenesis [BR:
ckn03009
]
Prokaryotic type
rRNA transcription factors
Calkro_1645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
S1
KH_NusA_C
DUF5801
KH_1
KH_2
Motif
Other DBs
NCBI-ProteinID:
ADQ46497
UniProt:
E4SFH2
LinkDB
All DBs
Position
complement(1812380..1813453)
Genome browser
AA seq
357 aa
AA seq
DB search
MPKKEQTLDFQELFSAIDELEREYKIEKDYVYSVLESALLTAYKQVKGIKDKNLSNVKVS
IDPEKGSVKIYEYRKVVENVKDRKNEISLEDAQKIDKRYKIGDIVAIEVPISQFSRKAAM
TVRQTVIGKIREKKRSIIFEDYSSKIDNIVTGIIQRIDKKNVIVEIEGGKVEAILPMEEQ
IPGEEYKPGTLMKFYLVDVKIPPKEKEPIVYLSRTHPNLIKRLMENEVPEIQEGIIEIKA
IAREAGSRSKVAVYSNSLKVDPVGACIGEKGIRIQNVLKHLNGEKIDIVKWSSDIGEFIK
NALSPAEVVHIDLNLIEKKAFVLVPNSQLSLAIGKGGQNARLAAKLTGWKIDIKGKD
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaaaaagagcaaactcttgattttcaggagctgttttcggcaattgatgagctt
gaaagagagtataagattgaaaaggattatgtatactcagttttagaatcagctcttttg
acagcttataagcaggtaaaaggaataaaagacaaaaatctttctaacgttaaagtttcc
attgatccagaaaagggaagtgtaaaaatttatgaatacagaaaagttgtcgaaaatgta
aaagatagaaaaaatgaaatttcacttgaggatgcacaaaaaattgataagagatataaa
attggtgatattgtagcaatagaggttcccatttcccagtttagcagaaaggcggcaatg
acagtcaggcagacagttatagggaagataagagaaaaaaagaggagcatcatatttgaa
gattattcttcaaagattgataatatagttacaggtattatacagaggattgataaaaag
aatgttattgtagaaattgaaggcgggaaggttgaagcaatacttccaatggaggagcaa
atacccggtgaagagtacaaaccagggacattgatgaaattttatcttgttgatgttaaa
attcctcccaaagaaaaagaacctattgtttatctttcaagaactcatccaaatttaata
aaaaggcttatggagaatgaagtgcctgagatacaagagggtataattgaaataaaagca
attgcaagagaggcagggtcaaggtcaaaggtagcagtttattctaacagcttaaaagtt
gatcctgttggagcttgtataggtgaaaaggggatacgaattcagaatgtgctaaagcac
ttgaatggtgagaaaattgacattgtaaaatggagtagtgacattggggaatttataaag
aatgctctcagccctgcggaggtcgtccatattgatttaaatttaattgaaaaaaaggca
tttgtccttgttccaaacagccaattgtctcttgcgattggcaagggtggacaaaacgct
cggcttgcagcaaaacttactggttggaaaatagatataaagggtaaagattga
DBGET
integrated database retrieval system
