Caldicellulosiruptor kronotskyensis: Calkro_1656
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Entry
Calkro_1656 CDS
T01357
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
ckn
Caldicellulosiruptor kronotskyensis
Pathway
ckn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ckn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Calkro_1656
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ckn03400
]
Calkro_1656
Enzymes [BR:
ckn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Calkro_1656
DNA repair and recombination proteins [BR:
ckn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Calkro_1656
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
Helicase_C
Zn_ribbon_PriA
ATPase_2
Cas3-like_C_2
PIF1
AAA_19
IstB_IS21
Glycos_transf_2
AAA_16
Motif
Other DBs
NCBI-ProteinID:
ADQ46508
UniProt:
E4SFI3
LinkDB
All DBs
Position
complement(1822886..1825060)
Genome browser
AA seq
724 aa
AA seq
DB search
MIAQICINYQDANVDKVFDYLVPTHLENSIEIGKRVYVSFGVSNRIVEGLVVGIKQTTDI
EINKLKCVLAVIDKFSIVSKEQIELAFSMKNYYALNLGEALSLVIPPFVSSKQIYNICAK
KHEENRNLDDDLKKLYESILKKPVSVNSKLVKENKEKITKLFLEGLLEFDLKNFDTRENA
EKNLPRVEPEFNLTDEQHKALNSIISAFDEGGYKNILLFGVTGSGKTEVYIRSIQYAIVK
GKSVIFMVPEISLTPQMIENVQSRIGNKVLVYHSKMKSIDRLNSWLAARNREAVVVIGPR
SAVFAPVKNLGLIIVDEEHEPSYKSEKSPRINAVEVAQMRAKINNIPIILGSATPSIEHY
YYAKKGKYSLCILKNRVNKTLPEVLIVDMKKEILEGNKSIFSRLLLSEIENNLKKGDQVL
LFLNRRGYSPIVICRECGYVYMCKNCSISLTYHKEGYLKCHYCGYKEEYKGACAKCNSRY
VRQYGSGTQKIEEEIKAYFKDARVLRMDSDATSKKDATQQLLKKFREKEADILVGTQMIA
KGLHFPDLTLVGVIDADILLNMPDFRSRERTFQLLTQVAGRSGREKPGKVIIQTFNPEDY
SIVFASKHDYESFYAQEMKLRKMMEYPPYSYVVNFVTVAREQNMAKRGIEHVYALLKEYE
MENDMKIYGPSENPIFKIENQYRYHILVKFKRAGQMISIANLIKERYNYSNASLIIDVNP
LDTL
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgatagctcagatttgtatcaactaccaggacgccaatgttgataaggtatttgattat
ttggtaccaacacatcttgaaaacagcattgagataggtaaaagagtgtatgttagcttt
ggagtttcaaatagaattgtggaggggcttgttgttgggataaagcaaacaactgatata
gagataaataagttaaagtgtgtgcttgccgtaattgataaattttctattgtttcaaaa
gaacagatagaacttgctttttcaatgaaaaattactatgcgctaaatctgggcgaggct
ttgtcacttgttatacctccttttgtgagcagcaaacagatatataatatctgtgcaaaa
aagcatgaagaaaatagaaacttagatgatgatttaaaaaagttgtatgaaagtattttg
aaaaaaccggtgagcgtaaattcaaagcttgtgaaagagaacaaagaaaaaataactaag
ctctttttggaagggcttttagagtttgatttaaagaattttgatacaagagaaaatgct
gagaaaaatctgccgcgggtagaaccagagtttaatttaactgacgaacagcacaaagcc
ctaaatagtataatctctgcatttgatgaaggaggttacaaaaatattctcttatttgga
gtcacagggagtgggaaaacagaggtttatataagatcaatacaatatgcaattgtaaaa
ggcaagagcgtaattttcatggtaccagaaatctcactcacaccacagatgatagaaaat
gttcaaagtagaataggtaataaagttttagtatatcacagcaaaatgaaaagtatagat
aggctaaacagttggcttgctgctagaaacagagaagcagttgtggtaattggtccccgt
tcagcagtttttgcacctgtcaagaaccttggtcttataattgtcgatgaagagcatgaa
ccaagctataaatctgaaaaatcgccgcggataaatgctgttgaggttgcccagatgaga
gctaaaataaataacatacccattatacttggctctgcaactccatctattgagcattat
tattatgctaaaaaaggaaagtattctctttgtatattgaaaaatagagtaaacaagacc
ctgccagaagttttaattgttgatatgaaaaaagaaatcttagaaggtaacaaatccatt
ttcagcaggcttttacttagtgagatagaaaacaacttgaaaaaaggggatcaggttctc
ctttttttaaacaggagaggttattctccaattgttatatgccgtgagtgtggctacgtt
tatatgtgtaaaaactgcagtatttcacttacataccacaaagaggggtatttgaaatgt
cactactgcgggtataaagaggaatataaaggtgcgtgtgctaaatgtaacagcaggtat
gtcagacaatatggtagtggcacccagaagatagaggaagagataaaagcgtactttaaa
gatgcaagggttttgcgtatggacagtgatgcaacttcaaaaaaagatgcgacacagcag
cttctaaaaaaattcagggaaaaagaggctgatattcttgttggtacgcagatgattgca
aaaggtttgcactttcctgacttgaccttggtgggtgtgatagatgcagatattcttttg
aacatgccagatttcagaagcagagaaagaacgtttcaactacttacacaggttgcagga
aggtctggcagggaaaagccaggaaaagttataattcaaacttttaaccctgaggattac
agcattgtatttgcttcaaagcacgactatgaaagcttttatgcccaggaaatgaaactc
agaaaaatgatggaatatccaccgtattcttatgtagttaactttgttacagtagcaagg
gaacagaatatggcaaaaagaggaatagagcatgtatatgctttgctcaaggagtatgaa
atggagaatgacatgaaaatttatggtccaagtgaaaatcccatctttaaaatagaaaac
cagtacaggtatcacatactggtaaagttcaaaagagctgggcagatgattagtatagca
aatctgattaaagaaagatataattatagtaacgcgtcgcttatcatcgacgtaaatcct
ttagatacactttaa
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