Caldicellulosiruptor kronotskyensis: Calkro_1698
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Entry
Calkro_1698 CDS
T01357
Name
(GenBank) MiaB-like tRNA modifying enzyme YliG
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
ckn
Caldicellulosiruptor kronotskyensis
Brite
KEGG Orthology (KO) [BR:
ckn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ckn03009
]
Calkro_1698
Enzymes [BR:
ckn01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
Calkro_1698
Ribosome biogenesis [BR:
ckn03009
]
Prokaryotic type
ribosomal protein modification factors
Calkro_1698
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
Vps35
CLP1_P
RIM2a_ZnF
Motif
Other DBs
NCBI-ProteinID:
ADQ46550
UniProt:
E4SFM5
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Position
complement(1858852..1860174)
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AA seq
440 aa
AA seq
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MIKVGFVSLGCNKNLVDSEIMMGACVKAGFEITSNAEDADVIVVNTCGFINDAKQESIDT
ILDMAEYKNKKCKFLIVTGCLTQRYKDEILEQMPEIDAILGVKEMLKLPEVIKDLYEGKQ
KIKVFDDTSSFVYLSSMPRMIATPSYYAYIKIAEGCNNRCSYCSIPLIRGKYTSRPIEDI
VKEAKELAEKGYKEIVLTAQDTTKYGLDLYGKKMLHALLEELEKIEKIKWIRFLYSYPED
VDESLIEVVKSSSKIVNYFDIPIQHINDRILKLMNRKTTKEGIKRLIEKIRRSFDEVIIR
TTVLVGFPTETDEEFEELCSFIKWAEFDRLGAFMYSQEEGTLASQLPQIDDEVKQRRYEN
ILNIQRKISKRQNKKRVGREYEVVIEAKDKNNFYIGRSQFEAPEVDGKVLVFSQKKLTAG
QFVNVKILDAFEYDLVGEII
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
ttgataaaggttggatttgtctcactggggtgcaacaaaaaccttgttgacagtgaaata
atgatgggcgcatgtgtcaaagctgggtttgagataacctcaaatgcagaagatgctgat
gtgattgttgtaaatacgtgtggttttataaacgatgcaaaacaggaatccatagatacc
atattagatatggctgaatataagaacaaaaaatgcaaatttttgatagtaacaggctgt
ttgacacaaagatacaaggatgagatattagaacaaatgccagaaattgatgcaatactt
ggtgtgaaagaaatgttaaaactgcctgaggtaataaaagatttgtacgaaggtaagcag
aagataaaagtgttcgatgatacttcttcttttgtatacttaagttcaatgccaagaatg
atcgctacacccagttactatgcctacataaagatagcagaagggtgcaacaacagatgc
tcttattgctccataccacttattagaggcaaatatacaagcagacccattgaggatata
gtaaaggaagcaaaagaattagcagaaaaaggatataaagaaattgtcctcacagctcag
gatactacaaagtatggtttggatttatatggcaaaaagatgttacatgctttgcttgaa
gagcttgaaaagattgaaaaaatcaagtggataagatttttatactcttaccctgaggat
gtggatgaaagtcttattgaggtggtaaaatcttcttctaaaatagttaactattttgac
attccaattcagcatataaatgatagaatattaaaactcatgaacagaaaaacaacaaaa
gaaggtataaaaaggctgatagagaagataagaagaagctttgatgaggttattataaga
acaacagttttagttgggttccctacagaaactgatgaggaatttgaagagctctgcagc
tttataaaatgggctgagtttgacaggcttggtgcttttatgtattcccaagaggaaggg
acacttgcttcgcagcttcctcagattgacgatgaggtaaaacagagaaggtatgaaaat
attttgaatattcagagaaaaatttctaaaaggcagaacaaaaagagagttggcagagaa
tacgaagttgttatagaggcaaaagataaaaacaacttttatattggaaggagccagttt
gaagcaccagaagttgacggaaaagttttggtgttctctcaaaagaaactgacagctggc
cagtttgtcaatgtgaagatactcgatgcatttgagtatgatttagtaggagagataatt
tga
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