Caldicellulosiruptor kronotskyensis: Calkro_1879
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Entry
Calkro_1879 CDS
T01357
Name
(GenBank) stage V sporulation protein D
KO
K08384
stage V sporulation protein D (sporulation-specific penicillin-binding protein)
Organism
ckn
Caldicellulosiruptor kronotskyensis
Pathway
ckn00550
Peptidoglycan biosynthesis
ckn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ckn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Calkro_1879
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ckn01011
]
Calkro_1879
Peptidoglycan biosynthesis and degradation proteins [BR:
ckn01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
Calkro_1879
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PASTA
PBP_dimer_2
IF2_N
Motif
Other DBs
NCBI-ProteinID:
ADQ46725
UniProt:
E4SG50
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All DBs
Position
complement(2048312..2050471)
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AA seq
719 aa
AA seq
DB search
MKEASLKVKKRILFVMAVFFLSFVLLVGRLFYLQLIKGEELKKRAFSQWTRERLVAPKRG
SIVDRNGKILAMSITAETVVASLNQIKDKEWTAKVLSGILQIDYKKILNKLNTKGVSDIY
IARNIDKEKADKIRKYALPGIYLTGGTKRVYPNGNFLAQVLGFTGIDDQGLSGLELYYDK
YLRGKPGAISAQTDASGRAAPFSEEFFKKPVDGYDLMLTIDETIQHFAEKYAQKALYDNK
AKNVTIIVEKVKTGEILAMTSKPDFDPNKPFELIYKDKFPDFDKLSQAEKNKIVQSMWRN
RALTDTYEPGSTFKIVTAAAGLEEGVVNENSQFYCRGYVKVANAILKCWRYYNPHGSENF
VEGVQNSCNPVFIEVGQRLGKEKLYKYINLFGFGQKTGIDLPGEAKGIVQPLGKVGPVEL
ATISFGQGISATPIQVISMINAVANDGVWVQPHVVKAIYDKDKKLIKSFDTPQKRRVLDQ
DVARRLKVILQSVVTNGTGHNAYLLGYKVAGKTGTSQKYDKTSKKYIASFGGFAPADNPE
VSVLVIIDEPDPSLYYGGLIAAPVARDLLNDILRYLDIQPQYTAEELKQIEFYKEYIVPN
TIGMNVEDAKKEINDNKFNAKVIGNGNKVIDQVPKAGFMLKEGSTIILFTQEMSQTTVAV
PNVVGLSFQDAQKVLSNSLLNIKVKGIKGKIIRQNPQPGTKVSIGSIIEVEIADKENAE
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagaagcgtctttaaaggtaaaaaagagaatcctttttgtcatggcagtgtttttt
ttaagctttgtgttgctggtgggacgccttttttatcttcaactgataaaaggagaagaa
ctcaaaaaaagagctttttcccagtggacgcgggagagacttgttgctcctaaaagagga
agcattgtagacagaaacggcaagatcttggcaatgtcaatcacagctgagacagttgtt
gcatctttgaatcagattaaagacaaagaatggacagctaaagtgctgtctggtattttg
cagatagactataaaaagattttgaataagcttaatacaaaaggagtttcagacatctac
atagcacgcaatattgacaaagagaaagcagataagataaggaagtatgccctgccaggg
atttacttaacaggcggaacaaaaagggtgtacccaaacggaaattttctggctcaggtt
cttggttttacaggaatagacgaccaaggactttctgggcttgaactttattatgataag
tatcttcgcggcaagcccggtgctatttcagcccagactgatgcaagcggcagggctgcg
ccgttttcggaagagttttttaaaaaacctgttgatggatatgacctaatgcttacaatt
gatgagacaatacaacattttgctgaaaaatatgctcaaaaggctttgtatgacaacaaa
gcaaaaaatgtgaccataattgtcgagaaggttaaaacaggcgagattctggccatgacc
tcaaaacctgattttgatccaaataaaccatttgagcttatatacaaagataagtttcct
gattttgataagctttctcaagcagagaaaaacaagatagtccagtcgatgtggagaaac
agagcactgacagacacatatgagcccgggtcaacatttaagatagtcaccgcagctgca
ggacttgaagaaggggttgtcaatgagaattctcagttttattgcaggggatatgttaag
gttgcaaatgcaatattaaagtgctggagatattacaacccgcatggtagcgaaaacttt
gttgagggtgttcaaaattcatgtaaccctgtgttcatagaggtggggcaaaggctggga
aaagagaaactttacaaatatataaacctttttgggtttggtcaaaagacaggaatagac
cttcccggtgaggcaaaagggattgttcagccacttggaaaggttggacctgttgaactt
gcaacaatttcttttggccagggaatttcagcaactcccattcaggttatcagcatgata
aatgcagttgcaaacgacggtgtgtgggtccagcctcatgttgtaaaggccatatatgat
aaggacaaaaaactgatcaagtcttttgacacaccacaaaaaagaagagttttagaccaa
gatgttgcgcgaaggcttaaagtaatacttcagtctgttgtgacaaacggaacagggcac
aatgcttatcttctgggttacaaagttgcaggaaaaacaggaacttcgcaaaagtatgac
aaaacatctaaaaagtatatagcatcatttggagggtttgcaccagctgacaatcccgag
gtgtcggttcttgtcataatagatgagcctgacccttcactttattatggaggtcttata
gccgcaccggttgcaagagatttgttaaatgatatactaagatatttggacatacaacca
cagtatacagccgaagagttgaaacagattgagttttataaagagtatatagtgccaaat
acaatcgggatgaatgttgaagatgcaaagaaagaaataaacgataacaagttcaacgca
aaagtcataggtaatggtaacaaagtgattgaccaggttccaaaagctgggtttatgttg
aaagaaggttcaacgataatattgttcactcaagagatgtcgcagacaactgtagctgtt
ccaaatgtagtgggcttgagtttccaggatgcacaaaaggtgctttcaaatagtcttctc
aacataaaagtgaaaggaataaaaggaaagattataagacaaaatccacaaccaggaaca
aaagtttcaataggttcaattattgaggttgaaattgctgacaaagagaatgcagaatag
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