Caldicellulosiruptor kronotskyensis: Calkro_2233
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Entry
Calkro_2233 CDS
T01357
Name
(GenBank) transcriptional regulator, LacI family
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
ckn
Caldicellulosiruptor kronotskyensis
Brite
KEGG Orthology (KO) [BR:
ckn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ckn03000
]
Calkro_2233
Transcription factors [BR:
ckn03000
]
Prokaryotic type
Helix-turn-helix
LacI family
Calkro_2233
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
Peripla_BP_4
LacI
HTH_3
HTH_24
HTH_23
MarR_2
HTH_11
HTH_38
HTH_10
HTH_Tnp_ISL3
HTH_IclR
HTH_19
HTH_Crp_2
MarR
HTH_28
HTH_5
HTH_29
HTH_26
HTH_AraC
Sigma70_r4_2
HTH_7
HTH_36
HTH_AsnC-type
SpoIIID
Fe_dep_repress
HTH_31
Sigma70_r4
HTH_50
Crp
Sigma54_DBD
KorB
Phage_terminase
Sigma70_r3
HTH_8
TetR_N
HTH_17
Xre-like-HTH
TnsD
MerR
Motif
Other DBs
NCBI-ProteinID:
ADQ47068
UniProt:
E4SH43
LinkDB
All DBs
Position
complement(2434911..2435930)
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AA seq
339 aa
AA seq
DB search
MRKNKNVTIKDIAKALGLSPSTVSRALNNYSDINPETRDKVIEMAKKLNYTPNIFAKSLV
TNKTKRVGLFIEDMEREGIYGVFYYEILISFRKAAMDNGYEVVLLSTSSEEQKRISFDAV
MQEKGLEGAFIMGLKMDDEYLNEIQKSTYPVVLLDIPIKNSNVGYVTTNNLKGAQLATEH
LINLGHKRIGFLNGHKKAYVSQERLNGYILALSKNGLQVDSELIYEGDFTEASGFKAADY
FVQKGVTAVFAASDMMAIGLIKRLKELGVDVPKKVSVVGFDDISLARYITPTLTTIRQNK
SEMGKSAFYLLLNLISKQPINHIILEPELVKRESTARLR
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgagaaagaacaagaatgtgacaataaaggatattgcaaaagctttgggactgtcgcca
agcactgtttcaagggcgctcaataattactcagatataaacccggagacaagagacaaa
gtaatagagatggccaaaaaactaaactacacaccaaacatctttgcaaaaagccttgtc
acaaacaagacaaaaagagttggactgttcattgaagacatggagagagaaggcatatac
ggtgttttctattatgaaatacttataagttttaggaaagctgcaatggacaatggttat
gaggttgttttgctctcaacatcttcagaggagcaaaaaagaatctcttttgatgcagtt
atgcaggaaaaagggcttgaaggtgcattcattatgggactaaaaatggacgatgagtat
ctgaatgaaatacaaaaaagtacctatcctgttgttttgcttgacattccaataaaaaac
tcaaatgtaggttatgtgacaacaaacaatctaaaaggtgcacagcttgcaacagaacac
ttgattaaccttggacacaaaagaatagggtttttgaatggtcacaaaaaagcatatgtc
agccaagaaagattaaacggttatatattggcactgagcaaaaacggacttcaggttgac
agtgaacttatttacgaaggtgattttacagaggcaagcgggtttaaggcagcagactat
tttgtccagaagggtgtcacagcagtttttgctgcatcagacatgatggcaatcggtctt
ataaaaagattaaaggaacttggtgtggatgtgcctaaaaaagtttcggttgtgggattt
gacgatatatccttggcacgttacatcacccccactcttacaacaataagacagaacaag
agtgagatgggcaaatcagccttttatttgcttttgaacctgatttcaaagcagccaata
aaccacattattttagagccagagcttgtaaaaagagaatcaacagcaaggctgcgctaa
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