Caldicellulosiruptor kronotskyensis: Calkro_2452
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Entry
Calkro_2452 CDS
T01357
Name
(GenBank) ABC transporter related protein
KO
K18888
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
ckn
Caldicellulosiruptor kronotskyensis
Pathway
ckn02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ckn00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Calkro_2452
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ckn02000
]
Calkro_2452
Transporters [BR:
ckn02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Calkro_2452
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_21
AAA_22
AAA
AAA_15
nSTAND3
Rad17
AAA_23
ABC_membrane_3
AAA_16
Zeta_toxin
RsgA_GTPase
AAA_30
DUF5906
AAA_29
AAA_5
SRP54
DEAD
TsaE
ABC_membrane_2
AAA_18
MMR_HSR1
AAA_24
APS_kinase
T2SSE
AAA_28
Motif
Other DBs
NCBI-ProteinID:
ADQ47263
UniProt:
E4SHN8
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All DBs
Position
complement(2690730..2692568)
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AA seq
612 aa
AA seq
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MPDRRQQSTFQPPVFGPGPVPGRGPGHRFSSKGAKPKDLKATLKRLWGYFREFKLLLLGI
FLTITIGAILQIISPLLIQKAIDNYIIPRKLNGLYKIVLAMIGIYIINSIFAYLQGYGMM
VISQRVVFKMRNELFSKLQKLPIKIFDTRAHGDLMSRLTNDIDVVTNTLNASLTSIFSSI
ITITGSIVVMLLLSPVLTALTLTVVPLMFWLTNLIASRTRKLFSQNQKLLGSLNSIIEED
ITGQKVIKVFSREEKEIKKFEKVNKELTQVGIKAQIFSGIIPPLMNLLNNFAFIIVAASG
GFLALKGFITVGTIASFIQYARQFTRPLNELANQFNQIQSAFAAAERVFEIMDEEEETSL
EDEIDLKDIKGEVEFKNVWFSYTKGQPVIKNISFKVKPGQMVALVGPTGSGKTTIVNLLS
RFYDVDSGQILIDGTDIRKINRQSLRKKLGIVLQDTFLFSESVKENIRYGKLSATDDEVI
LASKMANAHDFIKHLPHGYNTVLTDNGMDLSQGQRQLLAIARAILSDPAILILDEATSNI
DTRTEKLVQSAMLKLMQGRTSFVIAHRLSTIRNADLILVILNGEIIEQGTHDELLAKKGF
YYNLYMSQFVVV
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
ttgcctgataggagacaacaatctacatttcagccacctgtatttggaccaggtcctgtg
ccgggaagaggaccagggcacagattttcatccaaaggtgcaaaacctaaggatttgaaa
gctactttaaaaaggttatggggatattttagagagtttaagcttttgctattaggaata
tttttaactatcacaataggtgcaattttgcagattatctctccccttttgattcaaaaa
gctatagacaattatataattcccagaaaacttaatggactttataaaatagttttggca
atgatagggatttacattatcaattcaatttttgcttatcttcagggctatggtatgatg
gtaatttcgcaaagagttgtttttaagatgcgaaatgaacttttttcaaaacttcaaaaa
ctgccaataaaaatttttgacacaagagcgcacggggatttgatgtcgagactcacaaac
gacattgacgttgtcacaaacacattgaacgcaagcttgacttcaatattttcaagtatt
ataacaattacaggttcgattgttgttatgcttttattaagccctgttttgacagcttta
acattgacagttgtgccgcttatgttttggcttactaatcttatcgcatcaagaacaaga
aagttgttttctcaaaaccaaaagctattgggaagtttaaatagcataattgaagaagat
ataacaggtcagaaggttataaaggttttttcaagagaagaaaaagaaattaaaaagttt
gaaaaagttaataaggaactaacacaggttggaataaaagcacagatattttcaggaatt
attccgcctcttatgaaccttttgaacaactttgcgtttatcattgttgcggcatcaggg
ggttttttggcactaaaaggttttataacagttggcacaattgcaagttttattcagtat
gcaagacagtttacaaggccactcaacgagcttgcaaaccagttcaatcaaattcaatct
gcatttgccgcagcagagagagtatttgagataatggatgaggaagaagagacctcttta
gaagatgaaattgacctgaaagacatcaaaggcgaagttgaattcaaaaacgtgtggttt
tcatatacaaaaggtcagcctgttattaaaaatatcagcttcaaagtaaaacctgggcag
atggtagcactggttggtccaactggaagcggtaaaactacaattgtaaatttgcttagc
agattttatgatgtcgacagtggtcagattttaattgatggtactgacataagaaagata
aacaggcaaagtctcagaaaaaaacttgggattgttcttcaagatacatttttattctca
gaatctgtgaaagaaaatattcgatatggaaaactttcagccactgacgatgaagtgata
ttagcttcaaagatggcaaacgcacatgattttataaagcatcttccgcatggttataat
acagtgcttacagacaacggaatggacttaagccaaggtcagcgtcagcttttggctata
gctagagcaattttgtctgaccctgcaattcttatattagatgaggcaacaagtaacatc
gatacaagaacagaaaagcttgtccaaagcgcaatgctaaagctcatgcagggaagaaca
agttttgtaatagcccacaggctttcgactattagaaatgcagacctcatccttgtcata
ttaaatggtgaaattatcgaacagggtacacatgatgagcttttggcaaagaaagggttt
tattataatctatatatgagtcagtttgtggtggtgtga
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