Caldicellulosiruptor kronotskyensis: Calkro_2560
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Entry
Calkro_2560 CDS
T01357
Name
(GenBank) diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
Organism
ckn
Caldicellulosiruptor kronotskyensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_3
SBP_bac_3
PAS_9
PAS
PAS_4
PAS_8
PAS_11
Diguanyl_cycl_sensor
Lig_chan-Glu_bd
FliJ
KIAA0319
DMPK_coil
Motif
Other DBs
NCBI-ProteinID:
ADQ47360
UniProt:
E4SHY5
LinkDB
All DBs
Position
complement(2813307..2816357)
Genome browser
AA seq
1016 aa
AA seq
DB search
MRNNKAILFVFTVLLMLFHISLANASHTPVKFEVDKNYPPFSYTSDGRIYGFAIDLANLV
FEPDKFKLELSSDEWSQVYKKLVEGKIDATAPVAIIEERKEEVYFSKPIFTRHVGLYTQK
GFSGNISLKNLKDFKVGVMKADYTETYLKEKLGVKRYYTYPTVEDLIFALIDGNIEAALM
SQEVANYFLIKNNLSDRTQLKIKNIFTVKSAFAVNKKRPELVSYINQRLDYLINKGIFDE
LYCNYFSTYSPEYYEKKNRQILLSALYLLIIILFATSVIIFVMTRINRGLERGKQAYEKY
AQLLAENANAIVLTLNLKGEIIYFNKFAEQITGYKSEEVVGKKWVDIFIPSHRREYIENL
FKRIAEVKILNDHENEIVTKNGDIRWILWNNTLIESSYLNEPLIISTGLDITQIKRTQQL
LEESYEEIEQTNQELINTLEILNKQSEMLQEEKEKYKFLVENVSDCIWEIDFNEKKIEFY
GRLKDQFDIDVIKSKNDFSAWLEFFHEDDRSTVFKKLQDAILLHEEKVEFESRIRDKHGN
WRWISSHVQILYNEEGKPEKIIAVNIDWTAKKEYEHRIEYIAYYDTLTGLPNRKLFEERL
ESLIEKAEAEKTQGAVVLIDIDNFKDINDLYGHEAGDEYLIAVTKKVLEYLNSIKLDTFF
ARVGGDEFAVILDGLAKKEEVIEVCTKLLGIFESEIYIQKIEGCIFTSASIGVSFYPDDG
KSVKEIFRNVDMALSSAKENGKNDFQIFMPFMLMKNFKKIEIEKSLKKAIEADQFELYYQ
PVINLRNMEIHSVEALLRWHLPGKGIISPLEFIPVAEESGLIVRIGEMVIEKAFSDLKEW
ENKGIDYLHIAINLSTRQFKTKFFEKMVQKQIERYGVNPQKISFEITETGAVENFDVSLK
ILSFLCQLGIKFLIDDFGTGYSSLIYLRRLPIGGVKIDRSFISEIELSKESRAIVEGIIL
MAHKLDLKVIAEGVETKRELEILKEIGCDFAQGYLFSKPVPKTEIEKLLIERKIFV
NT seq
3051 nt
NT seq
+upstream
nt +downstream
nt
atgagaaataataaagctattctatttgtgtttacagtcttgctgatgttatttcatata
tcacttgcaaatgccagtcatacacctgtgaaatttgaagttgataaaaactatccgcca
ttttcttatacatcagacggcaggatttatggatttgccattgaccttgcaaaccttgta
tttgaacctgacaagttcaaacttgaactttcaagcgatgaatggagtcaggtttacaaa
aagcttgtcgaagggaaaattgatgcaacagctcctgtggctataattgaagaaagaaaa
gaagaagtgtacttttcaaaaccaatatttacacgacatgtaggactatatactcaaaaa
ggattttcagggaatatatcacttaaaaacctaaaagatttcaaggtaggagtaatgaaa
gcagattatactgaaacctatttgaaagaaaagctgggagtaaaaaggtattatacatat
cctacagttgaggacttaatttttgctttgattgatggaaatattgaagctgctttgatg
tctcaggaggttgctaattattttcttattaaaaataacctgagcgacagaactcagctc
aaaattaaaaatatctttactgttaaaagcgcgtttgcagtaaacaaaaaaagaccagaa
cttgtttcatatatcaatcagagattagattatcttataaacaaaggcatatttgatgaa
ctttattgtaactatttttctacatattcacctgaatactatgagaagaaaaacaggcaa
atattactgtctgccttgtatcttttaatcataatactttttgctacgtctgtgataata
tttgtaatgacaagaataaatagaggacttgaacgtggcaaacaagcttatgaaaagtac
gcccagcttttagcagagaatgcaaatgcaattgttttgactctcaacttaaaaggcgaa
ataatatattttaacaagtttgcagaacagattaccgggtacaaaagcgaagaggttgtg
ggcaaaaaatgggttgatatttttattccttcccacaggcgtgagtatatagaaaatctt
tttaaaagaattgcagaagtaaagattttaaatgaccatgaaaatgagattgtgacaaaa
aatggcgacataagatggattttgtggaacaatactcttatcgaaagctcgtacctaaat
gaaccgttgataatatcaacagggcttgacataacgcagataaaaagaacacagcagctt
ttagaagaaagctatgaagagattgaacagaccaaccaggaacttataaatacattagag
attttaaacaagcagtcggaaatgttgcaggaagagaaagaaaaatacaagtttctggta
gaaaatgtctctgattgtatctgggagatagattttaatgaaaagaagattgaattttat
ggaaggctcaaagatcaatttgacattgatgtgataaaatcaaaaaacgatttttcagca
tggcttgaatttttccatgaggatgacagaagtactgtattcaaaaaattgcaggatgca
atacttcttcatgaagagaaagtggaatttgaatcacgtataagagacaaacacggaaac
tggcgctggatttcctctcatgttcagattttatacaacgaagaaggtaaacctgagaag
attattgcagtaaacattgactggacagccaaaaaagagtatgaacataggatagaatac
attgcctactatgatacattgacaggtctgccaaacaggaaactgtttgaagagaggttg
gagagtctgattgaaaaagccgaggctgagaaaactcaaggtgctgttgtgctcatagac
attgacaattttaaggacattaacgacctgtatgggcatgaagccggagatgaatactta
attgctgtaaccaagaaggttttagaatatctcaatagcataaagcttgatacatttttt
gcgagagttggtggtgacgaatttgccgtaattctggacggtcttgctaaaaaggaggag
gtaatagaggtttgcactaagcttcttggcatctttgaaagtgagatttatatacaaaag
atagaaggttgcatctttacctccgcctcaataggtgtatcattttatcctgacgatggc
aaaagcgtcaaagaaattttcagaaatgttgacatggcactatcttcagcaaaagaaaat
ggcaagaacgattttcagatttttatgcctttcatgctgatgaagaattttaaaaagatt
gaaattgaaaaaagtctcaaaaaagctattgaagctgaccagtttgagctttattaccag
cctgttataaacttaagaaatatggagattcattctgtggaagcgcttttaagatggcac
ttgccaggaaaaggtattatatcaccacttgaatttattcctgttgcagaagaaagtggg
cttatagtaaggattggtgaaatggtcatagaaaaagctttttcagacctaaaagagtgg
gagaacaagggaattgactatttgcacatagcgataaatctttcaacgcgacaatttaaa
acaaagttttttgagaagatggtacaaaaacaaattgagcgatatggtgttaatccacaa
aaaatttcatttgagataaccgaaacaggagctgtcgaaaattttgatgtttcactcaag
attttaagtttcctctgccagctgggaataaaatttttgatagacgactttgggacaggg
tattcatctttgatttatttgagaaggcttccaattggaggagttaaaatagacagaagc
tttatttcagagattgaattatcaaaagagagcagagcaattgttgagggcataatattg
atggctcataagcttgatttaaaagttatagcagagggtgttgagactaaaagagagctt
gagattttaaaagaaataggatgcgattttgcacaggggtatttattttcaaagcccgtg
ccaaaaactgaaattgaaaagcttttgatagaaagaaaaatatttgtttaa
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