Citrobacter koseri: CKO_00468
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Entry
CKO_00468 CDS
T00592
Name
(GenBank) hypothetical protein
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
cko
Citrobacter koseri
Brite
KEGG Orthology (KO) [BR:
cko00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cko03016
]
CKO_00468
Enzymes [BR:
cko01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
CKO_00468
Transfer RNA biogenesis [BR:
cko03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CKO_00468
Prokaryotic type
CKO_00468
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
ABV11624
UniProt:
A8ADR1
LinkDB
All DBs
Position
449843..450655
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AA seq
270 aa
AA seq
DB search
MSAVEQPPVYKIALGIEYDGSKYYGWQRQNEVRSVQEKLEKALSQVANEPVNVFCAGRTD
AGVHGTGQVVHFETTALRKDAAWTLGVNANLPGDIAVRWVKAVPEDFHARFSATARRYRY
IIYNHRLRPAILGHGVTHFYEPLDAERMHRAAQCLIGENDFTSFRAVQCQSRTPWRNVMH
INVTRHGAYVVVDIKANAFVHHMVRNIVGSLMEVGAHNQPESWIAELLAAKDRRLSAATA
KAEGLYLVAVDYPERFDLPKTPLGPLFLAD
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcagtggaacaaccgccagtttataaaattgcgctgggcattgagtacgacggc
agcaaatattatggctggcaacgccagaacgaagtgcgcagcgttcaggaaaagctggaa
aaggcgctttctcaggttgccaacgaacctgttaacgtgttttgcgccgggcggacagac
gctggcgtacacggaacggggcaggtggtgcattttgaaactaccgcgttgcgtaaagac
gcggcgtggacgctgggtgtaaatgcgaatttacctggtgacatcgcggttcgttgggtt
aaagctgtacctgaggattttcacgcccggtttagcgcaacggctcgccgttatcgctac
atcatctacaatcatcggttgcgcccggcgattttaggtcatggggttacgcacttttat
gagccgctggacgcagaacgtatgcaccgggcggcgcagtgtctgattggtgaaaatgat
tttacctcgtttcgcgcggtacagtgccagtcgcgtacgccgtggcgaaacgtgatgcac
attaacgtgacgcgtcacggtgcgtatgtggtggtcgatatcaaagccaatgcctttgta
catcatatggtcaggaatattgtcggtagcctgatggaagtaggcgcccacaaccagccg
gagagctggatagcagagttgctggcggcgaaggacaggcggctttcagcagcaacggcg
aaagcggaagggttgtatctggttgcggttgattacccggaacggtttgaccttcccaaa
acgccactgggcccgctgtttctggcggactaa
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