Citrobacter koseri: CKO_01351
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Entry
CKO_01351 CDS
T00592
Name
(GenBank) hypothetical protein
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
cko
Citrobacter koseri
Brite
KEGG Orthology (KO) [BR:
cko00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cko03032
]
CKO_01351
03400 DNA repair and recombination proteins [BR:
cko03400
]
CKO_01351
Enzymes [BR:
cko01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CKO_01351
DNA replication proteins [BR:
cko03032
]
Prokaryotic type
DNA Topoisomerases
CKO_01351
DNA repair and recombination proteins [BR:
cko03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CKO_01351
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
DUF4795
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
ABV12488
UniProt:
A8AG75
LinkDB
All DBs
Position
1316219..1318816
Genome browser
AA seq
865 aa
AA seq
DB search
MGKALVIVESPAKAKTINKYLGNDYVVKSSVGHIRDLPTSGSAAKKSADSTSTKTAKKPK
KDERGALVNRMGVDPWHNWDAQYEVLPGKEKVVSELKQLAEKADHIYLATDLDREGEAIA
WHLREVIGGDDTRYSRVVFNEITKNAIRQAFDKPGELNIDRVNAQQARRFMDRVVGYMVS
PLLWKKIARGLSAGRVQSVAVRLVVERERDIKAFVPEEFWEVSASTTTPSGDALPLDVTH
QNDKPFRPVNREQTLAAVSLLEKARYSVLEREDKPTSSKPGAPFITSTLQQAASTRLGFG
VKKTMMMAQRLYEAGYITYMRTDSTNLSQDAVNMVRGYISDSFGKKYLPENPNQYASKEN
SQEAHEAIRPSDVAVMAEALKDMEADAQKLYQLIWRQFVACQMTPAQYDSTTLTVGAGDF
RLKARGRILRFDGWTKVMPALRKGDEDRTLPAVNKGDVLTLVELTPAQHFTKPPARFSEA
SLVKELEKRGIGRPSTYASIISTIQDRGYVRVENRRFYAEKMGEIVTDRLEENFRELMNY
DFTAQMEDSLDKVASHEAEWKNVLDNFFSDFTQQLDKAEKDPEEGGMRPNQMVLTSIDCP
TCGRKMGIRTASTGVFLGCSGYALPPKERCKTTINLVPENEVLNVLEGDDAETNALRAKR
RCQKCGTAMDSYLIDPKRKLHVCGNNPTCDGYEIEEGEFRIKGYDGPIVECEKCGSEMHL
KMGRFGKYMACTNDECKNTRKILRNGEVAPPKEDPVPLPELPCEKSDAYFVLRDGAAGIF
LAANTFPKSRETRAPLVEELYRFRDRLPEKLRYLADAPQQDPEGNKTLVRFSRKTKQQYV
AAEKDGKATGWSAFFVDGKWVEGKK
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaagctcttgtcatcgttgagtccccggcaaaagccaaaacgatcaacaagtat
ctgggtaatgattacgtggttaagtccagcgtcggtcatatccgtgatttgccgaccagt
ggctcagcagctaaaaagagcgccgactctacctccaccaaaacggctaaaaagcccaaa
aaggatgaacgtggcgctctcgtcaaccgaatgggggttgacccttggcataactgggat
gcgcagtatgaagtgctgcccggtaaagagaaggtcgtctctgaactgaaacaattggct
gaaaaagccgaccacatctatctcgcaaccgaccttgaccgcgaaggggaagccattgcc
tggcacctgcgggaagtgatcgggggtgatgacacgcgctatagccgcgtggtgtttaac
gaaataaccaaaaacgcgattcgccaggcgtttgataagccaggcgaactgaatatcgac
cgtgttaacgcgcagcaggcgcgccgctttatggaccgcgttgtgggctatatggtgtcg
ccattgctgtggaaaaaaattgcgcgaggcctgtcggcaggccgcgtacagtccgttgcc
gtgcgtctggttgttgagcgcgaacgtgacatcaaagcgttcgtaccggaagagttctgg
gaagtgagcgccagcacgacaacgccttctggcgatgccttgccgctcgacgttacgcac
cagaatgataaaccgttccgtccggttaaccgcgagcaaacgctggcggcggtcagcctg
ctggaaaaagcgcgttacagcgtactggagcgtgaagataaaccgaccagcagcaagcct
ggcgcgccgtttatcacgtcgacgctgcaacaggcggcgagcacgcgtctgggctttggc
gtgaaaaaaaccatgatgatggcgcagcgcttgtacgaagcaggctacatcacctacatg
cgtactgactccaccaacctgagccaggatgcggtaaacatggttcgcggttatatcagc
gatagcttcggcaagaaatacctgccggagaacccgaaccagtacgccagcaaagaaaat
tcacaggaagcgcacgaagcgatccgtccttctgatgtcgcggtgatggccgaagcgctg
aaggatatggaagcggacgcgcagaaactgtatcagctgatctggcgtcagtttgtcgcc
tgtcagatgacgccagcccagtacgattccaccacgctgacggtcggtgcgggtgatttc
cgcctgaaagcgcgtggccgcattctgcgtttcgacggctggacgaaagtcatgcctgcg
ctgcgtaaaggcgatgaggaccggacgttgcctgcggtgaataaaggcgatgtgttgacg
ctggttgaactgactccggcgcagcacttcaccaaaccaccggcgcgcttcagtgaagca
tcgctggttaaagagctggaaaaacgcggtattggtcgtccatccacctatgcgtcgatc
atctcgaccattcaggatcgcggttatgtccgcgtggaaaaccgtcgcttctatgctgaa
aaaatgggtgagattgtcaccgatcgactggaagaaaacttccgcgagctgatgaactac
gatttcaccgcccagatggaagacagcctcgacaaggtggccagccacgaagccgagtgg
aaaaacgtgcttgataacttcttcagcgattttactcagcagcttgataaagcggagaaa
gatcctgaagagggcggcatgcgtcctaaccagatggtgctgaccagcattgactgcccg
acatgcgggcgcaaaatggggattcgcaccgccagcaccggcgtgttcctgggatgttcc
ggctatgcgctaccgccgaaagagcgctgcaaaaccaccatcaacctggtgccggaaaat
gaagtgctgaacgtactggaaggcgatgatgcggaaaccaacgccttgcgtgcaaaacgt
cgttgccagaagtgcggcaccgcaatggacagctacctgatcgatccgaaacgcaagctg
catgtctgcggtaataacccgacctgcgacggttacgaaatcgaagagggcgagttccgc
attaaaggttatgacggcccgatcgttgagtgcgaaaaatgtggctctgaaatgcacctg
aaaatggggcgttttggtaagtacatggcctgtactaacgacgaatgtaaaaatacccgt
aagattctgcgtaacggtgaagtcgcgccgccgaaagaagatccggtgccgttgccggaa
ctgccgtgcgagaaatcggacgcgtatttcgtgctgcgtgacggcgccgcagggatcttc
ctcgcggcgaataccttcccgaaatcgcgtgaaacgcgtgcgccgttagtggaagagttg
taccgcttccgcgaccgtctgccggaaaaactgcgttatctggccgatgcgccgcagcag
gacccggaaggcaataagacgctggtgcgttttagccgtaagacgaaacagcagtatgtt
gccgctgaaaaagacgggaaagcgacgggatggtccgcattcttcgttgatggcaagtgg
gtagaaggtaagaaataa
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