Citrobacter koseri: CKO_02348
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Entry
CKO_02348 CDS
T00592
Name
(GenBank) hypothetical protein
KO
K03702
excinuclease ABC subunit B
Organism
cko
Citrobacter koseri
Pathway
cko03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cko00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CKO_02348
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cko03400
]
CKO_02348
DNA repair and recombination proteins [BR:
cko03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CKO_02348
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CKO_02348
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
UB2H
IF2_N
SBDS_domain_II
AAA_22
DUF4686
Motif
Other DBs
NCBI-ProteinID:
ABV13470
UniProt:
A8AJ07
LinkDB
All DBs
Position
complement(2172363..2174384)
Genome browser
AA seq
673 aa
AA seq
DB search
MSKPFKLNSAFKPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSGKTFTIANVIADLQRPT
MVLAPNKTLAAQLYGEMKEFFPDNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE
QMRLSATKALLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTVGMIIDQRAILRRLAELQ
YTRNDQAFQRGTFRVRGEVIDIFPAESDDIALRVELFDEEVERLSLFDPLTGQVESTIQR
YTIYPKTHYVTPRERIVQAMEEIKDELVDRRRIMQENNKLLEEQRLTQRTQFDLEMMNEL
GYCSGIENYSRYLSGRGPGEPPPTLFDYLPADGLLVVDESHVTIPQIGGMFRGDRARKET
LVEYGFRLPSALDNRPLKFEEFEALAPQTIYVSATPGNYELEKSGGEVVDQVVRPTGLLD
PIIEVRPVATQVDDLLSEIRLRAAINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDI
DTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
RAARNVNGKAILYGDKITPSMAKAIGETERRREKQQLYNEEHGIVPQGLNKKVVDILALG
QNIAKTKAKGKGKSRAAAKSGVVEMDMTPKALQQKIHELEGQMMQHAQNLEFEEAAEIRD
QLHQLRELFIAAS
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaccgttcaaactgaattccgcttttaaaccttcaggcgatcagccggaggcg
atacgtcgtctggaggaaggtcttgaagatggtctggcgcaccagacgctgttgggcgta
acggggtcagggaaaacgttcaccatcgccaatgtgattgccgatttacagcgcccgacg
atggtgcttgcgcccaataaaacgctggcggcccagttatacggcgaaatgaaagagttc
ttccctgacaacgcggtggaatatttcgtctcttactatgactactatcagccagaggcg
tatgtgcccagctccgacacctttatcgaaaaagatgcgtcggtgaatgaacacatagaa
cagatgcgactgtcggcgaccaaggcgctgcttgagcggcgggacgttgtggtcgtggct
tcggtttccgctatctacggtctgggcgatcccgatttatacctgaagatgatgctgcac
ctgacggtggggatgatcatcgatcagcgcgctatcctgcgccgtctggcggagttgcaa
tatacccgcaacgatcaggccttccagcgcggcactttccgcgtacgcggcgaggtcatc
gacatcttcccggcggagtctgacgatattgcgctgcgggttgagctgtttgacgaagag
gttgaacgtctgtcgctgtttgacccgctgaccgggcaggttgaatcgactatccagcgc
tacaccatctacccgaaaacgcactacgttacgccgcgcgagcgcatcgtacaggcgatg
gaggagatcaaagacgaactggtggacagacgcaggatcatgcaggaaaacaataagctg
ctggaagaacagcgcttaacccagcgtacgcagttcgatctggaaatgatgaacgaactg
ggatattgctcggggattgaaaactactcccgctacctttccgggcgcgggcctggcgag
ccgccgccgacgctgtttgattatctgccagccgatggcctgttagtcgtggatgaatct
cacgtcacgattccgcaaatcggcgggatgtttcgtggggacagggcgcgcaaagagacg
ctggtggagtacggtttccgtctgccgtcagcgctggataaccgtccgctaaaatttgaa
gagtttgaagcgctggccccgcaaaccatctacgtttccgccacgccgggcaactatgag
ctggagaaatccggcggcgaggtggtggatcaggtggtgcgtcctaccgggctgctggac
ccgatcattgaagttcggccggtggcgacgcaggttgatgatctgctctctgagatccgc
ctgcgggcggcgattaacgaacgtgtgctggtgacaacgctgaccaaacgaatggcggaa
gatcttaccgaatatctcgaagaacacggcgagcgcgtacgttacctgcactcggacatc
gataccgttgagcgtatggaaatcattcgtgatttgcgtctgggcgagtttgacgtgctg
gtggggatcaacctgttgcgagaagggctggacatgcctgaggtctcgctggtggcgatt
ctggacgcagacaaagaagggttcctgcgttcagagcgttcgctgattcagaccattggc
cgtgcggcgcgtaacgtcaacgggaaggcgatcctctatggcgataagatcaccccgtcg
atggcgaaagcgataggcgaaaccgaacgtcgtcgcgagaaacagcagttatacaacgaa
gagcacggtatcgttccgcaggggctgaataagaaagtggtcgatattctggcgttgggt
cagaacatcgcgaaaaccaaagcgaagggcaaagggaagtcccgcgcagcggcgaaatcg
ggtgtggttgagatggatatgacgccgaaagcgttgcagcagaaaattcatgagctggaa
ggccagatgatgcagcatgcgcaaaacctggagtttgaagaagccgcagagatccgcgac
cagttgcatcagctacgtgagctgtttatcgcggcgtcctga
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