Citrobacter koseri: CKO_03059
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Entry
CKO_03059 CDS
T00592
Name
(GenBank) hypothetical protein
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
cko
Citrobacter koseri
Pathway
cko03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cko00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CKO_03059
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cko03400
]
CKO_03059
Enzymes [BR:
cko01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CKO_03059
DNA repair and recombination proteins [BR:
cko03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CKO_03059
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PriA_3primeBD
WHD_PriA
DEAD
ResIII
PriA_C
Helicase_C
Zn_ribbon_PriA
AAA_30
Zn_ribbon_6
AAA_19
AAA_22
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
ABV14150
UniProt:
A8AKY7
LinkDB
All DBs
Position
2839309..2841507
Genome browser
AA seq
732 aa
AA seq
DB search
MPVAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERVGIVVSVSEQSELPLNEL
KAVVEVLDSEPVFSPSVWRLLLWAADYYHHPMGDVLFHALPILLRQGKPASNAPMWYWFA
TEDGHAIDLNSLKRSPKQQQALAALRQGKIWRDQVADLEFNDAALQALRKKGLCELASET
PGFSDWRTHYAVCGDRLRLNTEQATAVGAIHSASDSFSAWLLAGVTGSGKTEVYLSVLEN
VLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIV
IGTRSSLFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPA
LETLCNVRQKKYRMLRLTRRAGNARPALQHVLDLKGQKIQAGLAPALIARMHQHLQADNQ
VILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPIPRQCPSCG
STHMVPVGLGTEQLEQALAPFFPGVPVSRIDRDTTSRKGALEQHLAEVHRGGARILIGTQ
MLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVSGRAGRAGKQGEVVLQTHH
PEHPLLQTLLHKGYDAFAEQALAERQTLQLPPWTSHVIVRAEDHNNQQAPVFLQQLRNLI
QASPLADDKLWVLGPVPALAPKRGGRYRWQILLQHPSRIRLQHIVSGTLALINTLPDSRK
VKWVLDVDPIEG
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtcgcgcacgttgccttgcccgttccgctaccccgcacctttgactatctcttg
ccagaaggcatgaccgtcaaagccgggtgtcgggtgcgcgtgccgtttggcaaacagcag
gaacgcgtcgggattgtggtgtcggtcagcgaacaaagcgaactgccgcttaacgaactg
aaagcggtcgttgaggtactggacagcgagccggtcttttcgccctccgtctggcgtttg
ctgctttgggcggcggattactaccaccatccaatgggtgacgttctgtttcacgctctg
ccgattttgctgcgccaggggaaacccgccagcaacgcgccgatgtggtactggttcgcc
accgaagacggccacgctatcgatctcaatagcctgaagcgttcgcctaaacagcaacag
gcgctggccgcgctgcggcaggggaagatctggcgcgaccaggtggcggatcttgaattt
aatgacgcggcgctccaggcgctacgtaaaaaaggactgtgcgagctggcgagcgaaacg
cccggctttagcgactggcgcacccattacgccgtttgtggcgatcggctgcgtctcaat
accgaacaggccaccgccgttggcgccatccacagcgcgtcggacagcttttctgcctgg
ctgctggcgggcgttacgggttccggtaaaacagaggtctatctcagcgtactggaaaac
gtcctcgctcagggcaaacaggcgctggtgatggtgccggaaattggcctgacgccgcaa
accatcgcccgctttcgcgagcgcttcaacgcccccgtcgaagttctgcactccgggtta
aatgacagcgaacgtctctcagcctggctgaaagccaaaaacggcgaggcggcgattgtc
atcggcactcgctcatcgttgtttacgccgtttaaaaacctcggcgtcattgtgatcgac
gaagagcatgacagctcctataagcagcaggaaggctggcgttaccacgcccgcgacctg
gcggtataccgcgctcacagcgaacaaatcccgattattctcggctcggcaacaccggcg
ctggagacgttatgcaacgtgcgacaaaaaaagtaccgcatgctgcgcctgacgcgccgg
gcaggcaacgcacgccctgccctccagcatgtgctggatttaaaaggccagaagatccag
gccgggctggctcccgcgcttatcgcccgtatgcatcagcacctgcaggcagataaccag
gtcattctcttccttaaccgccggggatttgctcctgcgctgttatgccacgactgcggc
tggattgccgaatgtccgcgctgcgatcactattacacgttgcaccaggcgcaacaccac
ctgcgctgtcaccattgcgacagccagcgcccgataccgcgtcagtgcccttcctgcggc
tccacgcatatggtgccggttgggttagggacagaacagcttgagcaggcgttggcgccc
ttctttcccggcgtgccggtctcgcgcatcgaccgcgacaccaccagccgtaaaggcgcg
ctggagcagcatctggcggaagtccatcgcggcggcgcgcgcattttgatcggcacgcaa
atgctggcgaaagggcaccacttcccggacgtcaccctggtggcgttgctggacgttgac
ggcgcgctgttctcggcggatttccgttcggcggaacgttttgcccagctttacactcag
gtttccggccgcgccggacgcgccggaaaacagggcgaggtggtattgcagacccaccat
ccagagcaccctttgctgcaaaccttgctgcacaaaggctatgacgcttttgctgaacag
gcgctggccgagcggcaaacgctgcaacttccgccgtggaccagccatgtgattgtgcgg
gcggaagatcataacaaccagcaggcgccggtgttcctgcaacagttgcgtaatctgatt
caggccagcccgcttgcggatgacaagctctgggtattaggcccggtgcctgcgctcgcg
ccaaaacgcggcggccgctaccgttggcaaattttgttgcagcatccgtcgcgaattcgt
ctgcaacacatcgtcagcggcacgctggcgctcatcaatacgctacccgattcccgcaag
gttaaatgggtgctggatgtcgatcccattgagggataa
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