Citrobacter koseri: CKO_03182
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Entry
CKO_03182 CDS
T00592
Name
(GenBank) hypothetical protein
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cko
Citrobacter koseri
Pathway
cko03030
DNA replication
cko03430
Mismatch repair
cko03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cko00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CKO_03182
03430 Mismatch repair
CKO_03182
03440 Homologous recombination
CKO_03182
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cko03032
]
CKO_03182
03400 DNA repair and recombination proteins [BR:
cko03400
]
CKO_03182
Enzymes [BR:
cko01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CKO_03182
DNA replication proteins [BR:
cko03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CKO_03182
DNA repair and recombination proteins [BR:
cko03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CKO_03182
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
DNA_pol_IIIA_C
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
ABV14267
UniProt:
A8ALA4
LinkDB
All DBs
Position
complement(2945782..2949216)
Genome browser
AA seq
1144 aa
AA seq
DB search
MIDGLAKTGPLVKKAAALGMPALAITDFTNLCGLVKFYGTGHGAGIKPIVGADFHVRGTP
LGDELCQLTVLAANNTGYQNLTLLISKAYQRGYGAEGPVIDREWLTELKDGLILLSGGRM
GDVGRSLLRGNSALVDECVAFYEEHFSDRYYLELIRTGRQDEETYLHAAVELAETRGLPV
VATNDVRFINSEDFDAHEIRVAIHDGFTLDDPKRPRNYSPQQYMRSEDEMCELFSDIPEA
LENSVEIAKRCNVTVRLGEYFLPQFPTGDMTTEDFLVKKSKEGLEERLEFLFPDEAVRKE
KRPPYDERLDIELQVINQMGFPGYFLIVMEFIQWSKDNGVPVGPGRGSGAGSLVAYALKI
TDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDQVIEHVADMYGRDAVSQIITFGTM
AAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMTLAKAFEAEPQLPEIYEADEEVKALID
MARKLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDEAGQHPVTQFDKNDVEYAGLVKFDF
LGLRTLTIINWALEMINARREKNGEPPLDIAAIPLDDKKSFDMLQRSETTAVFQLESRGM
KDLIKRLQPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREEISYPDVQWQHESLKPV
LEPTYGIILYQEQVMQIAQVLSGYTLGGADMLRRAMGKKKPEEMAKQRSVFEEGARKNGI
DGELAIKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPAEFMAAVMTADMDNTEK
VVGLVDECWRMGLKILPPDINSGLYHFHVNDDGEIVYGIGAIKGVGEGPIEAIIEARNKD
GYFRELFDLCARTDTKKLNRRVLEKLIMSGAFDRLGPHRAALMNSLGDALKAADQHAKAE
AIGQADMFGVLAEEPEQIEQSYASCQPWPEQVVLDGERETLGLYLTGHPINQYLKEIERY
VGGYRLKDMHPTERGKVTTAAGLVIAARVMVTKRGNRIGICTLDDRSGRLEVMLFTDALD
KYQQLLEKDRILIVSGQVSFDDFSGGLKMMAREVMDIDEAREKYARGLAISLTDRQIDDQ
LLNRLRQSLEPHRSGTIPVHLYYQRADARARLRFGATWRVSPSDRLLNDLRGLIGSEQVE
LEFD
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
atgatcgatgggctggcgaaaaccgggccgctggtaaaaaaggcggccgcgttaggcatg
cctgcgctggcgatcaccgattttaccaacctttgcggtctggtgaagttctacggaacg
ggccacggcgcagggattaagcccattgtcggcgctgatttccatgttcgcggcactccg
ctgggagatgaactttgccagttgaccgtgctggcggcaaataatacgggctatcagaat
cttactctgttgatctcaaaagcctatcagcgtggctacggcgcagaagggccggtgatc
gacagggaatggctgactgaattaaaagacggtctgattttgctttccggtggccggatg
ggcgatgtgggccgcagtttgttgcgcggcaacagtgcgctggtggacgaatgcgtcgcc
ttctatgaagaacatttctccgaccgctactatctggagctgatccgcacgggtcggcag
gatgaggaaacgtatctgcatgcggcggttgagctggcggaaacgcgtggcttgccggtt
gtcgcaacgaatgatgtccgctttattaacagcgaggactttgacgcgcacgaaatccgc
gtggctattcacgatggttttacgctcgacgatcctaaacgcccgcgtaactattcgccg
cagcaatatatgcgtagcgaagacgagatgtgcgaactgttctccgacatcccggaagcg
ctggaaaacagcgttgagatagccaaacgctgtaacgtgaccgtccgtctgggcgaatac
ttcctgccgcagtttccgacgggcgacatgaccaccgaagacttcctggtcaagaaatcg
aaagagggtctggaagaacgtctcgaattcctgttccctgacgaagcggtgcgtaaagag
aagcgtcccccctatgacgaacgtctggacattgaacttcaggttattaaccagatgggg
ttccctggctacttcctcatcgtgatggagtttatccagtggtcgaaagataacggcgta
ccggtagggccggggcgcggttccggtgcggggtcgctggtggcctatgcgctgaaaatt
accgaccttgatccgctggaattcgacctgctgttcgaacgtttccttaacccggaacgt
gtctccatgcctgacttcgacgttgacttctgcatggagaaacgcgaccaggttatcgaa
cacgtagcggacatgtacggccgcgatgcggtatctcagattattaccttcggtacgatg
gcggcgaaagcggttatccgcgatgtggggcgcgtgctggggcacccatatggtttcgtg
gatcgtatctcgaaactggtgccgcctgacccgggcatgacgctggcgaaagcgtttgag
gcggaaccgcaactgccggaaatttacgaggcggatgaggaagttaaagcgctgatcgat
atggcgcgcaagctggaaggcgtcacgcgtaacgccggtaagcacgccggtggcgtggtt
atcgcgccgactaaaatcaccgattttgcgccgctgtactgtgatgaggccggtcagcac
ccggtaacgcagtttgataaaaacgacgtggaatacgccgggctggtcaaattcgacttc
ctggggctgcgcacgctcaccatcattaactgggcgctggagatgatcaacgcccgccgc
gagaagaatggcgaaccgccgttggatatcgcggcgatcccgctggatgacaagaaaagt
ttcgacatgctgcaacgctcggaaaccacggcggtcttccagcttgaatcccgtggcatg
aaagatctgattaagcgtctgcaacctgactgcttcgaagatatgatcgcgctggtggcg
ttgttccgccccggcccgttgcagtcgggcatggtggataacttcatcgaccgtaagcat
ggccgtgaagagatttcctatccagacgtgcaatggcagcatgaaagcctgaaacccgta
ctggagccgacctacggcatcatcctgtaccaggaacaggttatgcagattgcccaggtg
ctttccggttacacccttggcggcgcggatatgctgcgtcgtgcgatgggtaagaaaaag
ccggaagagatggcgaaacaacgttccgtctttgaagagggcgccagaaagaacggcatc
gacggcgagctggcgataaaaatcttcgacctggtggaaaagttcgccgggtacgggttt
aacaaatcgcactccgccgcctatgcgctggtgtcttaccagacgctgtggctgaaagcg
cactacccggcagagtttatggcggcggtaatgaccgccgatatggacaacaccgaaaaa
gtggtcggtctggtggatgaatgctggcgcatggggcttaaaatcctgccgccggatatc
aactcagggctgtatcacttccacgttaacgacgacggcgaaattgtttacggcatcggc
gcgatcaaaggcgtgggtgaaggcccgattgaagctatcatcgaggcgcgcaataaagac
ggttacttccgcgagctgtttgatttatgcgcccgcacggacacgaaaaagctcaaccgc
cgggtactggaaaaactgatcatgtccggggcgtttgaccgccttgggccgcaccgcgcc
gcgctgatgaactcgctgggcgacgcgctgaaagccgccgatcagcatgccaaagcggaa
gcgattgggcaggcggatatgtttggcgtactggcggaagagccggaacaaattgaacaa
tcctatgccagctgccagccgtggccggaacaggtggtgctggacggggaacgtgaaacg
ttggggctttacctgacgggacaccctatcaatcagtatttaaaagaaattgagcgctat
gtcggaggctaccggctgaaagacatgcatccgacagaacgtggtaaagtcaccacggct
gcggggctcgtgattgctgcaagggttatggtcaccaagcgcggcaatcgtatcggcatc
tgtacgctggatgaccgctctggacgtctggaggttatgctgtttaccgacgctctggat
aaatatcagcaattgctggaaaaagaccgcatacttatcgtcagcggacaggtcagcttt
gatgacttcagcggcgggcttaaaatgatggcccgtgaagtcatggatattgacgaagcc
cgggaaaaatatgctcgcgggcttgctatctcgctgacggacaggcaaattgatgaccag
cttttaaaccgactccgtcagtctctggaaccccaccgctcggggacaattccagtacat
ctctactatcagagggcggatgcacgcgcgcggttgcgttttggcgcgacgtggcgtgtc
tctccgagcgatcgtttgctaaacgatctccgtggcctcattggttcggagcaggtggaa
ctggagtttgactaa
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