Citrobacter koseri: CKO_03226
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Entry
CKO_03226 CDS
T00592
Name
(GenBank) hypothetical protein
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
cko
Citrobacter koseri
Pathway
cko03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cko00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CKO_03226
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cko03019
]
CKO_03226
Enzymes [BR:
cko01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
CKO_03226
Messenger RNA biogenesis [BR:
cko03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
CKO_03226
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
ABV14310
UniProt:
A8ALE7
LinkDB
All DBs
Position
2994391..2995755
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AA seq
454 aa
AA seq
DB search
MLNREESEAELAVARPHMTVIPREQHAISRKDISENALKVMYRLNKAGYEAWLVGGGVRD
LLLGKKPKDFDVTTNATPDQVRKLFRNCRLVGRRFRLAHVMFGPEIIEVATFRGHHEGND
SDRATSQRGQNGMLLRDNIFGSIEEDAQRRDFTINSLYYSVADFTVRDYVGGMQDLKDGV
IRLIGNPETRYREDPVRMLRAVRFAAKLDMRISPETAEPIPRLATLLNDIPPARLFEESL
KLLQAGYGFETYKKLREYSLFQPLFPTITRYFTENGDSAMERIIAQVLKNTDNRIHNDMR
VNPAFLFAAMFWYPLLEMAQKIAQESGLAYYDAFALAMNEVLDEACRSLAIPKRLTTLTR
DIWQLQLRMSRRQGKRAWKLLEHPKFRAAYDLLALRAEVENNAELQRLAQWWGEFQVSAP
PDQKGMLNELDEDPAPRRRHRRPRKRAPRREGTA
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
gtgctaaaccgcgaggagagcgaggctgagcttgccgtcgcccgtccacatatgacggta
atcccgcgtgagcagcacgctatttcccgcaaagatatcagtgaaaatgctctgaaagta
atgtacaggctcaataaagcgggatatgaggcctggctggttggcggcggcgtgcgcgat
cttctgctcggcaaaaaaccgaaagatttcgatgtcaccaccaacgcaacgccggatcag
gtgcggaagttgttccgtaactgtcgtctggtgggtcgccgtttccgtctggcgcacgtc
atgttcggcccggagattatcgaagtggcgacattccgtggtcaccatgaaggcaacgac
agcgaccgcgccacctcccagcgcgggcaaaacggcatgctgttgcgcgataacatcttc
ggctccattgaagaagacgcccagcgtcgcgacttcaccattaacagcctctattacagc
gtggcggatttcaccgtgcgcgactatgtcggcggtatgcaggatctgaaagatggcgtg
attcgcctgatcggcaaccctgaaacgcgttaccgcgaagatccggtgcgaatgctgcgt
gcagtccgtttcgccgcaaaactcgatatgcgcatcagcccggaaaccgcagagccgatt
ccgcgcctggcgaccttactcaacgatattccgcccgcgcgtctgtttgaagagtccctg
aaacttctgcaagcgggatatggtttcgaaacctacaaaaagctgcgggaatacagcctg
ttccagcccctgttccccaccattacgcgttatttcaccgaaaacggcgacagcgcgatg
gagcgcatcattgcgcaggtgctgaaaaataccgataaccgcatccataacgacatgcgc
gttaacccggcgttcttgtttgccgccatgttctggtatccgttgctggaaatggcgcag
aaaatcgctcaggagagcggcctggcctattacgacgcctttgcgctggccatgaacgag
gtgctggacgaagcgtgccgttcgctggcgatcccgaaacgcctcaccacgttaacccgt
gatatctggcaactccagttgcggatgtcccgccgccagggcaaacgcgcctggaagctg
ctggagcatccgaaattccgcgccgcatacgatctgctggcgttgcgcgccgaggtagaa
aacaacgctgaactgcaacgtctggcgcagtggtggggcgagttccaggtttcagcgccg
cccgatcagaaaggcatgctgaatgaactggatgaagaccccgcgccgcgccgccgccat
cgtcgtccgcgcaaacgcgcgccacgccgcgagggaaccgcgtga
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