Citrobacter koseri: CKO_03323
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Entry
CKO_03323 CDS
T00592
Name
(GenBank) hypothetical protein
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
cko
Citrobacter koseri
Brite
KEGG Orthology (KO) [BR:
cko00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cko03021
]
CKO_03323
Transcription machinery [BR:
cko03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
CKO_03323
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Cas3-like_C_2
AAA_34
Flavi_DEAD
GT_PLOD
Motif
Other DBs
NCBI-ProteinID:
ABV14406
UniProt:
A8ALP3
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All DBs
Position
3091144..3094050
Genome browser
AA seq
968 aa
AA seq
DB search
MPFTLGQRWISDTESELGLGTVVAMDARTVTLLFPATGENRLYARSDSPVTRVMFNPGDT
ITSHEGWQLQIDEVKEENGLLAYTGTRLDTEETAVTLREVLLDSKLVFSKPQDRLFAGQI
DRMDRFALRYRARKFQSEQYRMPWSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVG
LGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYTEAQH
DAYNPFETEQLVICSLDFARRNKQRLEHLCDAQWDLLVVDEAHHLVWSEDAPSREYMAIE
QLAERVPGVLLLTATPEQLGMESHFARLRLLDPSRFHDFEQFVEEQKNYRPVADAVAMLL
AGNKLSNEELNMLGDLIGEQDIEPLLQTANSDRDGAQNARQELVSMLMDRHGTSRVLFRN
TRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPEQIYQEFEGD
SGTWWNFDPRVEWLMGHLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSI
IERDRAAAWFSEEDSGAQVLLCSEIGSEGRNFQFASNLVMFDLPFNPDLLEQRIGRLDRI
GQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRAIYDTVYHDLIAYLATPENT
DGFDALIKTCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTSLIAFAM
NLFDIVGINQDDRGENLIVLTPSDHMLVPDFPGLPEDGCTITFERDVALSREDAQFVTWE
HPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELVYVVEAQAPKHLQLNRFLPPTP
VRMLLDKNGNNLAAQVEFETFNRQLSAVNRHTGSKLVNAVQQDVHAILQLGEAQAEKSAR
ALIDAARSEADEKLSAELSRLEALRAVNPNIRDDELAAIDSNRQQVMESLDQANWRLDAL
RLIVVTHQ
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgccttttacacttggtcaacgctggatcagcgatacagaaagcgaactgggacttgga
accgtcgtcgcgatggatgcgcgaactgtcaccttacttttcccggcgacaggtgaaaac
cgtctgtatgcgcgcagtgactcccccgtgacccgcgtgatgtttaaccctggtgatacg
attacaagccatgaaggctggcagctacaaatcgatgaagtaaaagaagaaaacggtctg
cttgcctatactggcacccgccttgataccgaagaaaccgccgtcacgctgcgtgaagtc
ctgctcgacagcaagctggttttcagtaaaccgcaggatcgcctgttcgccgggcaaatc
gaccggatggaccgattcgctctgcgctaccgcgcacgtaaatttcagagcgagcagtac
cgcatgccgtggagcggcctgcgcggtcagcgcaccagcctgattccccaccagctcaac
attgcccatgatgtcggtcgccgccacgcgccgcgcgtcctgctggcggatgaagtgggc
ttaggaaaaaccatcgaagccgggatgatcctgcaccaacagctgctgtctggcgcggcg
gaacgcgtgctgatcatcgtcccggaaactttgcagcatcagtggctggttgaaatgctg
cgccgcttcaacctgcgcttcgcgctgttcgacgacgagcgttacaccgaagcccagcac
gatgcctacaacccgtttgaaaccgagcaactggttatctgctcgctggacttcgcgcgt
cgcaacaaacagcgtctggaacatctgtgcgatgcacaatgggacctgctggtcgtcgat
gaagctcaccacctggtgtggagcgaagacgcgccaagccgcgaatatatggcgattgaa
caactggcggaacgcgtgcctggcgtcctgctgctgaccgcaacgccggaacagctggga
atggaaagccacttcgcccgtctgcgtctgctcgacccgagccgtttccacgacttcgaa
caatttgtcgaagagcagaaaaattaccgcccggtcgccgacgccgtcgccatgctgctg
gcaggcaacaagctgagcaacgaagagctgaacatgctcggcgacctgattggcgagcag
gacatcgaaccgctgctgcaaacggcgaacagcgaccgcgatggcgcgcagaatgcccgc
caggagctggtctccatgctgatggacagacacggcaccagccgcgtactgttccgcaac
acccgtaacggcgtcaaaggcttcccgaaacgcgagctgcacaccatcaagctgccgctg
ccaacgcaatatcagacggcgattaaagtctccggcattatgggcgcgcgtaaaagcgcg
gaggacagagcgcgcgatatgctctacccggagcagatttatcaggaattcgaaggggat
agcggcacctggtggaacttcgacccgcgcgtggagtggctgatggggcatctgaccagc
caccgctcgcagaaagtgctggtgatctgcgcgaaagccgccaccgcgctgcaactggag
caggtgctgcgcgagcgcgaaggcatccgcgccgccgtattccatgaaggcatgtccatt
attgaacgcgaccgcgccgccgcgtggtttagcgaagaagacagcggcgcgcaggttctg
ctgtgctcggaaatcggttctgaaggccgtaacttccagttcgccagcaacctggtgatg
tttgacctgccgtttaacccggatttgctggagcagcgtattggccgtctggaccgtatc
ggtcaggcgcacgatattcagatccacgttccgtatctggaaaaaaccgcgcagtccgtg
ctggttcgctggtatcacgaagggctggatgcctttgagcacacctgcccgaccggtcgc
gccatctacgatacggtgtatcacgatctgatcgcttacctggcgacgcctgaaaatacc
gacggttttgacgcgctgatcaaaacctgccgcgagcagcacgaagcgctgaaggcgcag
ctggagcaagggcgcgaccgtctgctggagatccactctaacggcggcgagaaagcgcag
gcgctggcagagagcattgaagaacaggatgacgacaccagcctgatcgccttcgccatg
aacctgtttgatatcgtcgggattaaccaggatgaccgtggtgagaacctgattgtgctg
acgccttccgatcatatgctggtgccggacttccctggcctgccggaagatggctgcacc
attacgttcgagcgtgatgtggcgctgtcgcgtgaagatgcgcagtttgttacctgggaa
catccgctgattcgcaacggcctggatctgattctgtctggcgataccggcagcagcacg
atttcgctgttgaaaaacaaagcgttgccggtgggaacgctgctggtggaactggtgtat
gtcgttgaagcgcaggcaccgaaacatttacagcttaaccgtttcctaccgccgacgccg
gtgcgcatgctgctggataaaaacggcaataacctggccgcgcaggtggagtttgaaacc
ttcaaccgccagctgagcgccgttaaccgtcataccggcagcaagctggtcaacgcggtg
caacaggacgtacacgcgattctgcaactgggcgaagcgcaggcggagaaatcggcccgg
gcgctgatcgacgccgcgcgtagcgaagcggatgaaaaactgtctgccgaactgtcgcgt
ctggaagcgctgcgcgccgttaacccgaacatccgtgatgatgaacttgcggcgatcgac
agcaaccgtcagcaggtaatggaaagcctggatcaggccaactggcgtctggatgccttg
cgtcttatcgtcgtcacgcatcagtaa
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