Citrobacter koseri: CKO_03421
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Entry
CKO_03421 CDS
T00592
Name
(GenBank) hypothetical protein
KO
K02344
DNA polymerase III subunit psi [EC:
2.7.7.7
]
Organism
cko
Citrobacter koseri
Pathway
cko03030
DNA replication
cko03430
Mismatch repair
cko03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cko00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CKO_03421
03430 Mismatch repair
CKO_03421
03440 Homologous recombination
CKO_03421
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cko03032
]
CKO_03421
03400 DNA repair and recombination proteins [BR:
cko03400
]
CKO_03421
Enzymes [BR:
cko01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CKO_03421
DNA replication proteins [BR:
cko03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CKO_03421
DNA repair and recombination proteins [BR:
cko03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CKO_03421
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_III_psi
Motif
Other DBs
NCBI-ProteinID:
ABV14504
UniProt:
A8ALZ0
LinkDB
All DBs
Position
complement(3190759..3191277)
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AA seq
172 aa
AA seq
DB search
MKGSSIVPGGDYSCLLAQFRRICYICAPDRQERFAMTSRRDWQLQQLGITQWSLRRPGAL
QGEIAISLPAHVRLVVVAEELPALTEPLMSDILRALTVSPDQVLPLTPDRVAMLPEGSRC
NSWRLGTEEPLLLEGAQVTSPAFNELRANPTARAALWQQICAYEHDFFPQSD
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggttcctctattgttcctggcggcgattatagttgtttgttggcgcagtttcga
cgaatttgctatatttgcgcccctgacagacaggagcgtttcgctatgacatcccgacga
gactggcaattacagcaactgggcattacccagtggtcgctgcgtcgccctggcgcgcta
cagggggaaatcgcgatttcccttccggcgcacgttcgtctggtggtcgtggcggaagaa
ttaccggcgctgaccgaacccttgatgagcgatattttgcgcgcattgaccgtcagtccc
gaccaggtattaccgttgacgcctgaccgcgtcgccatgctgccggaaggcagccggtgc
aacagctggcggctgggtactgaagagcctttgctgctggaaggcgctcaggtgacaagt
cctgcgtttaatgaattacgggcaaacccaacggcacgcgccgcactatggcaacaaatt
tgcgcatatgaacacgatttcttccctcaatccgactga
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