Citrobacter koseri: CKO_03535
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Entry
CKO_03535 CDS
T00592
Name
(GenBank) hypothetical protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
cko
Citrobacter koseri
Brite
KEGG Orthology (KO) [BR:
cko00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cko03400
]
CKO_03535
DNA repair and recombination proteins [BR:
cko03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
CKO_03535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_22
AAA_10
TrwB_AAD_bind
ResIII
AAA_16
FtsK_SpoIIIE
SLFN-g3_helicase
AAA
T2SSE
AAA_30
AAA_7
Hydrolase
AAA_25
AAA_18
CbiA
AAA_19
nSTAND3
SRP54
AAA_28
NTPase_1
AAA_6
ORC-CDC6-like
P-loop_TraG
TraG-D_C
Motif
Other DBs
NCBI-ProteinID:
ABV14614
UniProt:
A8AMA1
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Position
3293111..3294715
Genome browser
AA seq
534 aa
AA seq
DB search
MLPLLEFFTQSPQFSGEEYAAVAYTPGRINGENLMSAPLLIARTLESELFLLPGMTNRHG
LITGATGTGKTVTLQKLAESLSDIGVPVFMADVKGDLTGVAQEGEPSEKLLARLKNIGIT
DWQPHANPVVLWDIFGEKGHPLRATVSDLGPLLLARLLNLNEVQSGVLDIIFRIADDQGL
LLLDFKDLRAITQYIGDNAKSFQNQYGNISSASVGAIQRGLLSLEQQGAAHFFGEPMLDI
KDWMRTDANGKGIINILSAEKLYQMPKLYAASLLWMLSELYEQLPEAGDLEKPKLVFFFD
EAHLLFNDAPQVLLDKIEQVIRLIRSKGVGVWFVSQNPSDIPDNVLGQLGNRVQHALRAF
TPKDQKAVKAAAQTMRANPAFDTEKAIQELGTGEALISFLDAKGSPSVVERAMVIAPCSR
MGPVTDDERNGLINHSSLYGKYEDEVDRESAYEMLQKGVQATTEQQNNPPAKGKEVTVDD
GILGGLKEILFGSTGPRGGKRDGVVQSVAKSAARQVTNQIIRGMLGSLMGGRKR
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
ttgctcccccttttggaattcttcacgcaatctccgcaatttagcggtgaagagtacgcc
gcagttgcctatactccaggcaggataaatggagaaaatctcatgagtgcacccctgtta
attgcccgcacgctggaaagcgaactgttcctgttgccgggcatgaccaaccgtcacggg
ctgattaccggcgcaaccggaaccggcaaaacggttaccctgcaaaaactggctgagtcc
ctatcagacatcggcgttccggtatttatggcggatgtgaaaggtgacttaaccggcgtc
gcgcaggaaggcgaaccttctgaaaaactgctcgcacggctgaaaaatatcggcatcacc
gactggcaaccgcacgctaatccggtggtgctgtgggatatttttggcgaaaaaggtcat
ccactacgggcgaccgtctccgatcttgggccgctattgctggctcgcctgctgaacctg
aacgaggtgcagtccggcgtgctggatattatcttccgcatcgccgatgaccaggggctg
ttgctgctggactttaaagacctgcgggcgatcacgcagtatatcggtgataatgccaaa
tccttccagaaccagtatggcaatatcagcagcgcatcggtcggggcgatccagcgcggg
ctgctgtcgctggaacagcaaggcgcggcgcacttcttcggcgaaccgatgctggacatc
aaagactggatgcgtaccgatgccaacggcaaaggtattatcaacatccttagcgccgaa
aaactctaccagatgcccaaactgtatgctgccagcctgctgtggatgctctccgaactg
tatgagcaactgccggaagcgggcgatctggagaaaccgaagctggtgttcttcttcgac
gaagctcacctgctgttcaacgacgctccgcaggtgctgctggataaaatcgaacaggtc
attcgcctgatccgctccaaaggcgtgggcgtctggttcgtctcacagaacccttccgat
atcccggacaacgtgctcggtcagctaggcaaccgcgtacagcacgccctgcgcgccttc
acccccaaagatcagaaagcggtgaaagccgccgcgcaaaccatgcgggcgaatccggcg
tttgataccgagaaagcgattcaggaactgggcaccggcgaggcgctgatctccttcctg
gatgccaaaggcagcccgtcagtggttgaacgagcgatggtcatcgcaccgtgctcacgc
atggggccggtgacggacgatgagcgtaacgggcttatcaatcactcctcgctgtacggc
aaatatgaagacgaagtcgatcgcgaatcggcgtatgaaatgctgcaaaaaggcgttcag
gccaccaccgagcagcaaaacaatccgccagcaaaaggcaaagaagtcaccgttgatgac
ggaattcttggcgggctgaaagagatattgtttggcagtaccgggccacgcggcggcaaa
cgggatggtgtggtgcagagcgtcgccaaaagcgcagcgcgtcaggtaacgaaccaaatt
atccgggggatgttaggtagcctgatgggcggtagaaaacgctag
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