Citrobacter koseri: CKO_03569
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Entry
CKO_03569 CDS
T00592
Name
(GenBank) hypothetical protein
KO
K03485
LacI family transcriptional regulator, trehalose operon repressor
Organism
cko
Citrobacter koseri
Brite
KEGG Orthology (KO) [BR:
cko00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cko03000
]
CKO_03569
Transcription factors [BR:
cko03000
]
Prokaryotic type
Helix-turn-helix
LacI family
CKO_03569
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LacI
Peripla_BP_3
Peripla_BP_1
HTH_23
HTH_3
HTH_31
HTH_IclR
HTH_7
MarR_2
AAA_18
HTH_Tnp_ISL3
Peripla_BP_4
HTH_Crp_2
MarR
CENP-B_N
TrmB
HTH_26
HHH
HTH_28
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
ABV14648
UniProt:
A8AMD6
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All DBs
Position
3321992..3322939
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AA seq
315 aa
AA seq
DB search
MQNRLTIKDIARLSGVGKSTVSRVLNNESGVSERTRERVEAVMNQHGFSPSRSARAMRGQ
SDKVVAIIVTRLDSLSENLAVQTMLPAFYEQGYDPIMMESQFSPELVEEHLGMLRRRNID
GVVLFGFTGICEEMLAPWQASLVLLARDASGFASVCYDDEGAIHTLMQRLYDQGHRAISF
LGVPHSDVTTGKRRHEAYLSFCKKNKLHPVAALPGLAMKQGYEHAADVITPDTSALVCAT
DTLALGASKYLQEQRIDSLQLASVGNTPLMKFLHPEIITVDPGYAEAGKQAALQLIEQIN
GRSDPRQIVIPSTLS
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgcagaatcggctgaccattaaagacattgcccgcttaagcggcgtagggaaatccacc
gtttcccgcgtgctcaacaacgaaagcggggtaagtgaacggactcgtgaacgtgtggaa
gccgtaatgaatcaacatggtttttccccttcccgttccgcacgcgccatgcgcgggcaa
agtgataaagtggtcgccattattgttacccgtctggattccctgtcagaaaacctcgcc
gtccagaccatgctgcccgcgttttacgagcagggttacgatcccatcatgatggagagt
cagttctcgccagaactggtagaagaacacctggggatgctcagacggcgtaatattgac
ggcgtggtgctgttcggttttaccggtatttgcgaggagatgcttgcgccctggcaggcc
tcgctggtgctgctggcaagggacgccagtggttttgcgtcggtgtgctatgacgacgaa
ggcgctatccataccttaatgcagcgtctgtatgaccagggacatcgggcgatcagcttt
ctcggcgtgcctcacagcgacgtcacgaccggtaagcgccgtcacgaagcctatctgagt
ttctgcaaaaaaaataaactgcaccctgtcgccgctctgcctggcctggcgatgaaacaa
ggctatgagcacgctgcggatgtcattacgccagacaccagcgcgctggtctgcgcgacc
gatacgctagcgctgggcgccagtaaatatttgcaggaacagcgtatcgattctctgcaa
ctggcgagcgtcgggaacacgccgctgatgaaatttctccacccggagattatcacggtt
gatcccggttacgctgaagccgggaaacaagcggccttacagctgatcgagcaaatcaac
ggccgcagcgatccccgccagatcgtcattccgtctaccctctcctga
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