Citrobacter koseri: CKO_03692
Help
Entry
CKO_03692 CDS
T00592
Name
(GenBank) hypothetical protein
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
cko
Citrobacter koseri
Pathway
cko03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cko00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CKO_03692
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cko03019
]
CKO_03692
03110 Chaperones and folding catalysts [BR:
cko03110
]
CKO_03692
03029 Mitochondrial biogenesis [BR:
cko03029
]
CKO_03692
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cko04147
]
CKO_03692
Enzymes [BR:
cko01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
CKO_03692
Messenger RNA biogenesis [BR:
cko03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
CKO_03692
Chaperones and folding catalysts [BR:
cko03110
]
Heat shock proteins
HSP60 / Chaperonin
CKO_03692
Mitochondrial biogenesis [BR:
cko03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
CKO_03692
Exosome [BR:
cko04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
CKO_03692
Exosomal proteins of other body fluids (saliva and urine)
CKO_03692
Exosomal proteins of breast cancer cells
CKO_03692
Exosomal proteins of colorectal cancer cells
CKO_03692
Exosomal proteins of bladder cancer cells
CKO_03692
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
ABV14769
UniProt:
A8AMQ6
LinkDB
All DBs
Position
complement(3430227..3431873)
Genome browser
AA seq
548 aa
AA seq
DB search
MAAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREI
ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQSIITEGLKAVAAGMNPMDLKRGI
DKAVAAAVEELKTLSVPCSDSKAIAQVGTISANSDETVGKLIAEAMDKVGKEGVITVEDG
TGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELESPFILLADKKISNIREMLPVLEAV
AKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTV
ISEEIGMELEKSTLEDLGQAKRVVINKDTTTIIDGVGEESAIQGRVTQIRQQIEEATSDY
DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALI
RVASKIAELKGQNEDQNVGIKVALRAMESPLRQIVLNCGEEPSVVANTVKSGDGNYGYNA
ATEEYGNMIDMGILDPTKVTRSALQYAASVAGLMITTECMVTDLPKGDAPDLGAAGGMGG
MGGMGGMM
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagacgtaaaattcggtaacgacgctcgtgtgaaaatgctgcgcggcgta
aacgtactggcagacgcagtgaaagtgaccctcggtccgaaaggccgtaacgtggttctg
gataaatctttcggtgcgccgaccatcactaaagatggtgtttccgtagcgcgtgaaatc
gagctggaagacaagttcgaaaacatgggcgcgcagatggtgaaagaagttgcctctaaa
gcgaacgacgcggcaggcgacggcaccaccaccgcgaccgtactggctcagtccatcatc
actgaaggtctgaaagccgttgctgcgggcatgaacccgatggatctgaaacgtggtatc
gacaaagcggttgctgctgcggttgaagaactgaaaaccctgtccgtaccgtgctctgat
tctaaagccattgctcaggttggtactatctccgctaactccgacgaaaccgtaggtaaa
ctgatcgctgaagcgatggacaaagtcggtaaagaaggcgtgatcaccgttgaagacggt
accggtttgcaggatgagctggacgtggttgaaggtatgcagttcgaccgtggctacctg
tctccttacttcatcaacaagccggaaactggcgcagtagaactggaaagcccgttcatc
ctgctggctgataagaaaatctctaacatccgcgaaatgctgccggttctggaagccgtt
gcgaaagcaggcaaaccgctgctgatcatcgctgaagatgtggaaggcgaagcgctggct
acgctggtggttaacaccatgcgcggcatcgtgaaagtggcggcggttaaagcgccgggc
ttcggtgatcgtcgtaaagcgatgctgcaagatatcgcaaccctgaccggtggtactgtt
atctctgaagagatcggtatggagctggaaaaatctaccctggaagacctgggtcaggca
aaacgcgttgtgatcaacaaagacaccaccaccatcattgatggcgtgggtgaagagtct
gcgatccagggccgtgtcactcagatccgtcagcagatcgaagaagccacttccgattac
gaccgtgaaaaactgcaagagcgcgtagcgaaactggcaggcggtgttgcggttatcaaa
gttggcgctgcgaccgaagttgaaatgaaagagaaaaaagcacgcgttgaagatgccctg
cacgcgacccgtgctgcggttgaagaaggcgtagttgccggtggtggcgttgcgctgatt
cgcgtcgcgtctaaaattgcggaactcaaaggccagaacgaagaccagaacgtgggtatc
aaagttgcgctgcgcgcaatggaatccccgctgcgtcagatcgtgctgaactgcggcgaa
gaaccgtctgttgtggctaacaccgttaaaagcggcgacggcaactacggttacaacgca
gcaaccgaagaatacggcaacatgatcgatatgggtatcctggacccgaccaaagtaacc
cgttctgctttgcagtacgcggcatccgtggctggtctgatgatcactaccgagtgcatg
gtaactgacctgccgaaaggcgatgctcctgacttaggcgcagccggtggcatgggcggt
atgggtggaatgggcggcatgatgtaa
DBGET
integrated database retrieval system