Citrobacter koseri: CKO_03843
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Entry
CKO_03843 CDS
T00592
Name
(GenBank) hypothetical protein
KO
K03701
excinuclease ABC subunit A
Organism
cko
Citrobacter koseri
Pathway
cko03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cko00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CKO_03843
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cko03400
]
CKO_03843
DNA repair and recombination proteins [BR:
cko03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CKO_03843
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CKO_03843
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_29
AAA_16
nSTAND1
RsgA_GTPase
DnaJ_CXXCXGXG
AAA_25
AAA_23
NACHT
Viral_helicase1
T2SSE
cobW
ExoX-like_C
ScfRs
Motif
Other DBs
NCBI-ProteinID:
ABV14919
UniProt:
A8AN56
LinkDB
All DBs
Position
3571139..3573961
Genome browser
AA seq
940 aa
AA seq
DB search
MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC
PDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHAKTLENLASQGYIRARID
GEVCDLSDPPKLELQKKHTIEVVIDRFKVRSDLSQRLAESFETALELSGGTAIVADMDDT
KAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPEL
SLAGGAIRGWDRRNFYYFQMLKSLAEHYKFDVEAPWGSLSQNVHKVVLYGSGKESIEFKY
INDRGDTSVRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARH
VFVENTPLPAISDMSIGHAMDFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTL
SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRNLGNT
VIVVEHDEDAIRAADHVIDIGPGAGVHGGQVVAEGPLEAIMAVPESLTGQYMSGKRKIEV
PKQRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQR
QLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE
SRSRGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY
KGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKL
ARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHQLRDQGNTIVVIEHNLDVIKTADW
IVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atggataagatcgaagttcggggcgcccgcacccataatctcaaaaacatcaacctcgtc
atcccgcgcgacaaactgattgtcgtcaccgggctttcgggttctggcaaatcctcgctc
gcttttgacaccttgtatgccgaagggcagcgtcgttacgttgaatccctttccgcatat
gcgcgtcagtttctgtctttgatggaaaaaccagatgtcgaccatattgaggggctgtcg
cccgctatctcaattgagcagaaatcgacatcccataacccgcgctctacggtaggtaca
attaccgaaatacatgactatctgcgtctgctgttcgcccgcgtgggtgaaccgcgctgc
ccggatcatgacgtcccgctggcggcgcaaaccgtcagccagatggtggataacgtgctg
tctcagccggaaggcaaacgcctgatgctgctggcgcccattattaaagagcgcaaaggc
gagcacgccaaaacgctggaaaacctggccagccaaggctacatccgcgcccgtattgat
ggcgaggtctgcgatctctccgatccgccgaagctggagctgcaaaagaaacacaccatt
gaggtcgtgatcgatcgtttcaaagtccgtagcgatctgtcccagcgcctggcggaatct
tttgaaaccgcgctggaactctccggcggcaccgcgatcgtcgcggatatggacgatacg
aaagcggaagagctgctcttctccgccaacttcgcctgcccaatttgcggctacagtatg
cgcgagctggaaccgcgtctgttctcgttcaacaacccggcgggagcctgcccgacctgc
gacggcctcggcgtacagcaatatttcgatcccgatcgcgtgatccagaacccggagctt
tctctggctggcggcgcgattcgcggctgggatcgccgtaacttctattacttccagatg
ctgaaatcgctggcggaacactataagttcgacgtggaagctccgtggggaagtctgagt
cagaatgtgcataaagtcgttctgtacggttccggcaaagagagcatcgagttcaaatac
atcaacgatcgtggcgacacctccgtgcgtcgccatccgttcgaaggcgtgctgcacaac
atggagcgccgttacaaagagacggagtccagcgcggtacgtgaagagttagctaaattc
atcagcaaccgtccgtgcgccagttgtgaaggcacgcgtctgcgccgtgaagcacgtcat
gtcttcgtcgagaatactccgctgcctgcgatctccgacatgagcatcggccatgcgatg
gacttcttcaacaatctcaagctcgcaggccagcgtgcaaagattgcggagaagatcctc
aaggagattggcgaccgcctcaagttcctggtaaacgtcggcctcaactacctgacgctg
tcccgttcggcagagaccttgtccggcggcgaagcccagcgtatccgtctggccagccag
attggcgcggggctggtaggcgtgatgtatgtgctggatgagccgtctatcggtctccat
cagcgcgataacgaacgtttgctgggaacgctgattcacctgcgtaatctcggcaatacc
gtgattgtggtggagcatgacgaagacgccatccgcgccgccgaccatgtgatcgatatc
ggccccggcgctggcgtacacggcggtcaggtcgtggccgaagggccgctggaggcgatt
atggcggtgccggaatccctcaccggccagtacatgagcggcaaacgcaagattgaagtg
ccgaaacagcgcgttcccgcgaacccggagaaagtgctgaagctgaccggcgcgcgcggc
aacaacctgaaagacgtcaccctgacgctgccggttggcctgtttacctgtatcaccggc
gtatccgggtcgggtaagtctacgcttatcaacgacacactgttcccgattgcccagcgc
cagttaaacggggcgaccattgcggaacctgcgccgtatcgtgatattcaggggctggag
catttcgacaaagtcatcgacatcgaccagagtccgattggccgtacgccgcgctctaac
ccggcaacgtataccggcgtgtttacgcccgtacgtgagctgttcgctggcgtgccggaa
tcacgctcacgcggctatacgccgggacgtttcagctttaacgtgcgcggcgggcgttgc
gaagcctgtcagggcgacggcgtcatcaaggttgaaatgcacttcctgccggatatttac
gtaccgtgcgaccagtgcaaaggcaagcgctataaccgcgaaacgctggagattaagtac
aagggcaagactatccacgaagtgctggatatgaccatcgaagaagcgcgcgaatttttt
gacgccgttccggcgctggcgcgtaagctgcaaacgttgatggacgtgggtctgacctac
atccgtctcggtcagtccgccaccacgctctccggcggtgaagcacagcgcgtgaagctg
gcgcgtgaattgtcgaaacgcggcaccgggcagacgctgtacattctggatgaaccgacc
actggtctgcattttgccgatattcagcaactgctggacgtgctgcaccagttgcgcgac
caaggcaacaccattgtggtgattgagcacaacctggacgtcattaagacggcggactgg
attgtcgatctcggcccggaaggcggcagcggcggcggcgaaattcttgtttccgggacg
ccggagacggtcgcagagtgtgaagcgtcacatactgcccgtttcctcaagccaatgctg
taa
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