Citrobacter koseri: CKO_04171
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Entry
CKO_04171 CDS
T00592
Name
(GenBank) hypothetical protein
KO
K03566
LysR family transcriptional regulator, glycine cleavage system transcriptional activator
Organism
cko
Citrobacter koseri
Brite
KEGG Orthology (KO) [BR:
cko00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cko03000
]
CKO_04171
Transcription factors [BR:
cko03000
]
Prokaryotic type
Helix-turn-helix
LysR family
CKO_04171
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
MarR_2
Motif
Other DBs
NCBI-ProteinID:
ABV15236
UniProt:
A8AP23
LinkDB
All DBs
Position
complement(3876617..3877534)
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AA seq
305 aa
AA seq
DB search
MSKRLPPLNALRVFDAAARHLSFTRAAEELFVTQAAVSHQIKSLEDFLGLKLFRRRNRSL
LLTEEGQSYFLDIKEIFSQLTEATRKLQARSAKGALTVSLLPSFAIQWLVPRLSSFNSTY
PGIDVRIQAVDRQEDKLADDVDVAIFYGRGNWPGLRVEKLYAEYLLPVCSPLLLTGDKPL
KTPEDLAKHTLLHDASRRDWQTYTRQLGLNHINVQQGPIFSHSAMVLQAAIHGQGVALAN
NVMAQSEIEAGRLVCPFNDVLVSKNAFYLVCHDSQAELGKIAAFRQWILTKAAAEQEKFR
FRYEQ
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaacgattaccacccttaaatgcattacgtgtttttgatgccgcagcgcggcat
ttaagcttcactcgcgcagcagaagagctttttgtgacacaggccgcagtaagtcaccaa
atcaagtcacttgaggattttttggggctaaaactgttccgtcgtcgcaatcgttcgctt
ttgctaacggaagaggggcagagctatttcctcgacatcaaagagattttttcgcaatta
accgaagcgacgcgtaaacttcaggcgcggagtgcaaaaggcgcgcttacggtcagttta
ttgcccagttttgcgatccagtggctggttcctcgactctcaagctttaactcaacttat
ccgggaatcgatgtcagaattcaggccgtggaccgtcaggaagataagctggctgatgat
gtcgacgtcgctattttttatgggcgtggcaactggccgggcttgcgcgtcgaaaaattg
tacgcagaatatttactgccggtgtgttcaccgttattactgacgggcgataagccgtta
aagacgccggaagatctggcaaaacatacattactgcatgatgcttcgcgaagagactgg
cagacctatacgcgtcagttggggctgaatcatattaatgtgcagcagggacctattttc
agccatagcgcaatggtgctacaggctgccatccacggacagggggttgcgctggcgaac
aacgtcatggcgcaatcagaaattgaagccgggcgtcttgtctgtccctttaacgacgtt
ctggtcagtaaaaatgctttttatctggtttgtcatgacagtcaggcagaactgggtaaa
atagccgcctttcgtcagtggattctgaccaaagcggccgctgaacaagaaaaattccgc
tttcgttacgaacaataa
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