Corynebacterium kroppenstedtii: ckrop_1022
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Entry
ckrop_1022 CDS
T00896
Name
(GenBank) putative formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
ckp
Corynebacterium kroppenstedtii
Pathway
ckp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ckp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ckrop_1022
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ckp03400
]
ckrop_1022
Enzymes [BR:
ckp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
ckrop_1022
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
ckrop_1022
DNA repair and recombination proteins [BR:
ckp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ckrop_1022
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
NFACT_N
AstE_AspA_cat
Motif
Other DBs
NCBI-ProteinID:
ACR17775
UniProt:
C4LIX0
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All DBs
Position
1214894..1215703
Genome browser
AA seq
269 aa
AA seq
DB search
MPEGHVIHRLASSLNREFAGQETAVSSPQGRFATEADQLNHTVLKHAEAHGKHLFIDFEA
NQAAHVVYIHLGLIGSLRFSDLAEPRGQVRLRIASDTRAADLRGPQWCRLITDEEKDTAI
GKLGADPLDPHADPSRSYQRIKRSSKPISTLLMDQHIFAGVGNIYRAETLFRLGLNPELR
GKDLTDDDLHAIWNDLVETMTMGFRVGKIDTVRPEHTPEAMGREPRVDAHGGEVYVYRRA
GLPCYVCGTTIVERKVDGRNLFWCPTCQA
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaaggccacgtcattcatcggctcgcttcatcactgaaccgcgaattcgccgga
caggaaactgctgttagctcgccacaggggcgattcgcgacagaggccgatcagctcaac
cacaccgtgcttaagcacgccgaagcgcacggaaaacacttgttcattgacttcgaggcc
aatcaagcggcacatgtcgtttatattcacttaggtctcattggaagccttcgtttctca
gacctcgcggaaccacgaggccaggttcgtttacgaatagcctccgacacacgggcagct
gatttacgcggtccacagtggtgccggctcatcaccgacgaagaaaaagacaccgcgatt
gggaaactcggggctgacccactcgacccacacgccgatcccagccgcagctatcaacga
atcaaacggtcgtcgaaaccgattagtaccttgctgatggatcagcacatattcgcaggc
gtcggaaatatttaccgcgccgaaacgctattcaggttaggacttaaccctgagctgcga
ggtaaagatcttaccgatgacgacctccatgcgatatggaatgacctcgtcgaaacgatg
acgatggggttccgggtcgggaaaatcgacaccgttcggccagaacacacgcctgaggcc
atggggcgggaaccacgcgtcgacgctcatggtggtgaggtttatgtttaccgacgtgcc
gggctcccttgctacgtctgcggaaccactattgtcgagcgcaaggtcgacggcagaaac
ctcttctggtgtcccacctgccaggcgtga
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