Clostridium kluyveri NBRC 12016: CKR_0007
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Entry
CKR_0007 CDS
T00832
Symbol
gyrA
Name
(GenBank) DNA gyrase A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
ckr
Clostridium kluyveri NBRC 12016
Brite
KEGG Orthology (KO) [BR:
ckr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ckr03032
]
CKR_0007 (gyrA)
03400 DNA repair and recombination proteins [BR:
ckr03400
]
CKR_0007 (gyrA)
Enzymes [BR:
ckr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CKR_0007 (gyrA)
DNA replication proteins [BR:
ckr03032
]
Prokaryotic type
DNA Topoisomerases
CKR_0007 (gyrA)
DNA repair and recombination proteins [BR:
ckr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CKR_0007 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Retrotran_gag_2
Motif
Other DBs
NCBI-ProteinID:
BAH05058
UniProt:
B9DXT3
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Position
6359..8782
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AA seq
807 aa
AA seq
DB search
MMFDEGKVLPIDISQEMKKSYIDYAMSVIVSRALPDVRDGLKPVHRRILYSMYELGITPE
KGYRKCARIVGDVLGKYHPHGDSSVYDALVRMAQDFSIRYTLVDGHGNFGSVDGDSAAAM
RYTEAKMDKITVEMLRGINKNTVDFIPNFDGEEKEPVVLPSRFPNLLVNGSAGIAVGMAT
NIPPHNLVEVINGVIMIIENPEVTIYELMTSIKGPDFPTAGIIVGTSGIKSAYETGRGKI
IVRAKTEIQEEKGKNRIVITEIPYQVNKSKLIENMADLVKNKRIDGISDIRDESDRDGMR
IVVELKRDANANITLNQLYKHTRMQDTFGVIMLTLVDNEPKVLNLKQMLVHYLKFQEEIL
TRRTKFELDKAEARAHILEGLRIALDYIDEVINLIRSSKTTEIARNGLIDKFNLSEKQAQ
AILDMRLQRLTGLEREKIENEYNELMDIIKHLKEILENKSILLNMIKDELIEIRDKYGDE
RRTEIQISNDDINIEDLIEEEEVVITLTHAGYIKRISADTYSSQRRGGKGIQAMTTKEDD
FVEHIFITSTHSHILFFTNKGKVYKLKGYEIPDAGRTAKGTNLVNLLPLDGDEQIQAVIS
FKEIDDDNYFIMATKRGLVKKTEINQYASIRKNGLNAINLRDGDELIGVKMTTGDSEVLI
FTKNGYAIRFSEKDVRPTGRNTTGVKAITLRKKDIAVAMDIASNKEDILVVSENGFGKRT
PVTEYTIHKRGGKGIITYKSTEKTGLIVGARVVKDEDEMMLINSSNVAIRLNVSDISTTS
RNAMGVTLMRTEEEQRVVAIAKINCTE
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
ttgatgtttgatgaaggaaaagttttaccgatagacataagtcaggagatgaaaaaaagt
tatatagattatgcaatgagtgttattgtcagccgtgcacttccagatgtacgtgatggg
ttaaagccagttcatagaagaatattatattctatgtatgaattgggaattactcctgaa
aaaggctataggaaatgtgcaagaattgtaggagatgttttaggtaaataccatccacat
ggagattcatctgtttatgatgctcttgttagaatggctcaggacttttctattagatat
actttagttgatggtcatggaaattttggctctgtagatggagatagtgctgcagctatg
agatatacagaagccaaaatggataaaataactgttgaaatgttacgtggaataaataaa
aatacggtagactttattcctaattttgatggtgaggaaaaggaaccagtggttttgcct
tcaagattcccaaatttacttgtaaatggttctgcaggaatagcagtaggcatggctacc
aatataccaccacataatcttgttgaagttataaatggggttataatgataatagagaat
ccagaagttactatttatgaacttatgacatctataaaaggacctgattttccaacagcg
ggaataatagttggtacatctggtataaaaagtgcttatgaaactggaagaggaaagata
atagtaagagctaaaactgaaattcaagaagaaaaaggtaaaaatagaatagtaataact
gaaattccataccaggtgaacaaatccaaacttatagaaaatatggcggatttagttaaa
aataaaagaatagatggtatatcagatattagagatgaatcagatagagatggaatgaga
attgttgtagaattgaaaagagatgctaatgctaatataactttaaaccagttgtataaa
catacaagaatgcaggatacttttggagttataatgctaacacttgtggataatgagcct
aaagttttaaatttgaaacagatgcttgtacattatttgaaatttcaagaagagattttg
acaagaaggaccaaatttgagttagataaagcagaagcaagagctcatattctggaagga
ttaagaatagcattggactatattgatgaagtaataaatctaataagatcatctaaaact
acagaaattgcacgaaatggtttaatagataaatttaatctttctgaaaaacaggcacag
gctattttggatatgagacttcaaaggcttacaggacttgaaagagaaaaaattgaaaat
gaatataatgaactaatggatataataaaacaccttaaagaaatattagagaataaatca
attctattaaatatgattaaggatgaattaatcgaaataagagataaatatggtgatgaa
agaagaactgaaatacagataagtaatgatgatataaatattgaggatcttatcgaagaa
gaagaagtggttataactttaactcatgcaggatatataaaaaggatctctgcagatact
tattcttcccagagaagaggtggaaagggaatacaagctatgactacaaaagaagatgac
tttgtagaacatatatttattacttctactcacagccatattttattttttaccaataag
ggaaaagtatataaattaaaaggttatgaaattcctgatgcaggtaggacagctaaaggt
actaatttagttaacctgttgcctctggatggagatgaacaaattcaagcagttatatct
tttaaagagattgatgatgataattattttataatggctactaaaaggggattagttaaa
aagactgaaataaatcaatatgcatctataagaaaaaatggattaaatgctataaattta
agagatggagatgaacttataggtgttaaaatgactacgggtgatagtgaagtgttgatt
ttcactaaaaatggatacgctataagatttagtgaaaaagatgtaaggcccactggaagg
aatactacaggagttaaagctataaccttaagaaaaaaagatattgctgttgctatggat
attgcaagtaataaagaagatattttagtagttagtgaaaacggatttggaaaaagaact
ccagtaactgaatatactattcataaaagaggtggaaaaggaattataacctataaatct
acggaaaaaacaggcttaatagtaggtgctagagttgtaaaagatgaggatgagatgatg
ctcataaatagtagtaatgtagctataaggcttaatgtatctgatatttctactactagt
agaaatgctatgggagttaccctcatgcgtacagaagaggaacaaagagttgtggctata
gctaaaataaattgtactgaataa
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