Clostridium kluyveri NBRC 12016: CKR_0013
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Entry
CKR_0013 CDS
T00832
Name
(GenBank) hypothetical protein
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
ckr
Clostridium kluyveri NBRC 12016
Pathway
ckr00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ckr00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CKR_0013
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ckr01007
]
CKR_0013
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ckr03016
]
CKR_0013
Enzymes [BR:
ckr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
CKR_0013
Amino acid related enzymes [BR:
ckr01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
CKR_0013
Transfer RNA biogenesis [BR:
ckr03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
CKR_0013
Prokaryotic type
CKR_0013
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
Laminin_I
DUF3086
Motif
Other DBs
NCBI-ProteinID:
BAH05064
UniProt:
B9DXT9
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All DBs
Position
20840..22120
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AA seq
426 aa
AA seq
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MLDLKRIRNNPEEIKKQLLNRGEDFELSIIDKVVSLDEKRRKILVEVEALKNKRNQDSGE
IAKIKRAGGNADTLVVEMKQVSDNIKQYDIQLSEINDKIEYIMLRIPNIPNPAVPEGKLD
EDNVEIRRWMEPTKFKFQPKAHWDIGTNLNILDFERGGKVAGSRFTFYRGLGARLERAIV
SYYLDFHTEKHGYEEILPPYMVNRTSMIGTGQLPKFEEDAFRVANNDFFLIPTAEVPVTN
FYRNEVLKGEDLPIKYVAYSACFRAEAGSAGRDTRGIIRQHQFNKVELVKFAKPEQSYDE
LEKLTNDAEDVIKGLKIPYRVVKICKGDLGFTAALKYDIEVWMPSYNRYVEISSCSNFED
FQARRVNIKYKETPKDKPKYIHTLNGSGVAIGRTVAAILENYQQDDGSVLIPEILKPYMG
GREVIK
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgttagatttaaaaaggataagaaataatccagaagaaataaagaaacaacttttaaat
aggggagaagattttgaactgtcaattattgataaagtagtatctttagatgaaaaaaga
agaaaaattttagttgaagtagaagctttaaaaaataaaagaaatcaagattctggagaa
atagctaagataaaaagagctggtggaaatgcagatactttagttgtagaaatgaagcaa
gtttcagacaatataaaacaatacgatattcaactatcagaaataaatgataaaatagag
tacataatgcttagaatacctaatattccaaatccagcagttccagaaggaaagctggat
gaagataatgtagaaattagacgatggatggagcctactaaatttaaatttcaacctaaa
gctcattgggatataggtacgaatcttaatatacttgattttgaaagaggaggaaaagta
gcaggttctaggtttactttttatagggggttaggggcaagacttgaaagagctattgta
tcttattatttggattttcatactgaaaaacacggatatgaagagatattaccaccttat
atggtaaacagaaccagcatgattggtacaggacaacttccaaagtttgaagaagatgct
tttagggtagcaaataatgattttttcttaattccaacggcagaagtgccagtaactaat
ttttatagaaatgaagtattaaaaggagaagatcttccaataaaatatgttgcatatagt
gcatgttttagagctgaagcaggttcagcaggaagagatactagaggaattataagacag
catcaattcaacaaggttgaactcgttaaatttgcaaaacctgaacaatcttatgatgaa
cttgagaaattaactaatgatgcagaagatgtaattaaaggattaaaaattccctataga
gtagttaagatatgtaaaggggatcttggatttacagctgcccttaagtatgatatagag
gtttggatgccaagttacaatagatatgtagaaatatcaagttgtagtaattttgaagat
tttcaagcaagacgagttaatattaaatacaaggagactccaaaagataaacccaaatat
attcatacattaaatggttctggagtggctataggaagaactgtagcagctattttagag
aattatcaacaggatgatggaagtgtattgattcctgaaatattaaaaccatacatgggt
ggaagagaagtaataaaatag
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