Clostridium kluyveri NBRC 12016: CKR_0176 Help Entry CKR_0176          CDS       T00832                                  Name (GenBank) hypothetical protein   KO K03046   DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] Organism ckr  Clostridium kluyveri NBRC 12016 Pathway ckr03020   RNA polymerase Brite KEGG Orthology (KO) [BR:ckr00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     CKR_0176  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:ckr03021]     CKR_0176    03400 DNA repair and recombination proteins [BR:ckr03400]     CKR_0176 Enzymes [BR:ckr01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      CKR_0176 Transcription machinery [BR:ckr03021]  Prokaryotic type   Bacterial type    RNA polymerase     Core subunits      CKR_0176 DNA repair and recombination proteins [BR:ckr03400]  Prokaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TCR (transcription coupled repair) factors      DNA-directed RNA polymerase complex (RNAP)       CKR_0176 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 RPOC_hybrid Apocytochr_F_C Motif Other DBs NCBI-ProteinID:  BAH05227 UniProt:  B9DYA2 LinkDB All DBs Position 204583..208107 Genome browser AA seq 1174 aa AA seqDB search MFELNNFDALQIGLASPEKIREWSRGEVKKPETINYRTLKPERDGLFCERIFGPQKDWEC HCGKYKRIRYKGIVCDRCGVEVTKAKVRRERMGHIELAAPVSHIWYFKGIPSRMGLILDM SPRALEKVLYFASYVVLDPKETQLLKKQLLTEKEYREAVDKYGEQNFVASMGAESVKKLL EEIDLEQLSLVLKEDLKNSTGQKKIRIIRRLEVVESFRKSGNRPEWMVIDVIPVIPPDLR PMVQLDGGRFATSDLNDLYRRVINRNNRLKKLLDLGAPDIIVRNEKRMLQEAVDALIDNG RRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPELKMYQCGLPK EMALELFKPFVMKKLVERGLAHNIKSAKRMVERVQAQVWDVLEEVISDHPVLLNRAPTLH RLGIQAFQPVLVEGRAIKLHPLSCTAYNADFDGDQMAVHVPLSVEAQSEARFLMLAAHNI LKPSDGKPVVVPTQDMVLGSYYLTVEREGAKGEGRYFSFPDEVIMAYQLKQIDINAKIKV KMTKIIDGKYISGIIDATAGKIIFNECVPQDLGFIDRSKPGNEFKLEIDFLVAKKNLGKI INKCYMKHGATKTSIMLDKIKARGYHYSTISGITVSTSDMEVPEAKKRLLSESDAAVDKI EKMYRRGFISEDERYQRVIERWTKTTEDVADELMNNLDKFNPIFMMADSGARGSKSQIKQ LAGMRGLMANPSGKIIELPIRASFREGLDVLEYFISTHGARKGNADTALKTADSGYLTRR LVDVSQDVIVREEDCGTYEGYDVSEIKEGNEVIESLSERLTGRYSAEDIIDPNNHQIIVP KNSYMDSKLADRIEASGIKKVKIRSVFTCKSRHGVCSKCYGMNMATAQKIDIGESVGIIA AQSIGEPGTQLTMRTFHTGGVAGSDITQGLPRVEELFEARKPKGLAIVSEVSGTVKMEET KKKRSVSVITDNGEEVTYDIPFGSRIKVSNGDLISAGDEVTEGSVNPHDILRIKGVQGVK NYLLSEVQKVYRLQGVDINDKHLEVVIRQMTRKIKIEESGDTELLPGTMIDIFDFEEENA RVEASGGSAAQGRVALLGITKAALATESFLSAASFQETTRVLTDAAIKGKIDPLLGLKEN VIIGKLIPAGTGMTRYRSIKINTENEVQENQLEA NT seq 3525 nt NT seq  +upstreamnt  +downstreamnt ttgtttgaattaaataactttgatgcacttcaaataggcttagcttcaccagaaaaaata agagaatggtcgagaggtgaggtaaagaaacccgaaacaataaattataggactctaaag ccagagagagatggtttattttgtgaaaggatctttggacctcaaaaggattgggaatgt cactgtggcaagtataaaaggattagatataaaggtatagtttgtgataggtgtggagta gaagtaactaaggcaaaagtaagacgtgagagaatgggccatattgagctggcggctccg gtatctcatatatggtattttaagggcataccatcccgtatgggacttattttagatatg tctccaagggctttagaaaaggtgttatattttgcgtcttatgttgttttagatccaaaa gaaactcaactattaaaaaagcaattgctaactgaaaaagagtatagggaagccgtagat aaatacggagaacaaaactttgtagctagcatgggagcagaatctgttaaaaagctttta gaggaaatagatcttgaacaattatctttggtattaaaggaagatttaaaaaatagcaca ggacaaaagaaaataagaataataagaaggttagaagttgttgaatcttttagaaaatct ggaaataggcctgaatggatggttatagatgtaattcctgttataccaccagatttaaga cctatggttcaattagacggaggaagatttgccacttcagatttaaatgatctttataga agagttataaatagaaataatagacttaaaaaattattggatttaggagcaccagacata atagtaagaaatgaaaaaagaatgcttcaggaagcagtggatgctcttatagataatgga agaaggggaaggccagtaactggacctggaaatagaccattaaaatccttatcagatatg ttaaagggtaagcagggaaggtttagacaaaatctacttggaaaacgtgttgactactca ggacgttctgttatagtagttggtcctgagcttaaaatgtatcaatgtggattacctaaa gaaatggcacttgagctttttaaaccttttgtgatgaaaaagttggttgaaagaggatta gctcataatattaaaagtgcaaaaagaatggtagaacgggttcaagctcaagtttgggat gtattagaggaagtaatatctgatcatccggtgcttttaaatcgtgctcctacacttcac agattagggatacaggcatttcaacctgtacttgtagaaggcagggctataaaacttcat ccactatcttgtacagcatataatgctgattttgatggagaccagatggcagttcatgtt ccgctttcagtagaagctcaatcagaggctagatttttaatgcttgctgcccataatata ttgaaaccttcagatggtaaaccagtagttgtaccaacgcaggatatggtattggggtca tattacctaactgtagaaagagaaggagccaaaggagagggaagatacttttcttttcca gatgaagtaataatggcataccaattaaaacaaattgatataaatgctaaaataaaagtg aaaatgacaaaaattatagatggaaaatatataagtggcataattgatgctacagcagga aaaataatatttaatgaatgtgtaccacaggatctgggattcatagatagaagtaaacct gggaatgaatttaaactagagattgattttcttgtagctaagaaaaatttaggtaaaata ataaataaatgttatatgaaacatggagctacaaaaacatctataatgctggataaaata aaagcacgaggatatcactattcaactataagtggaataacagtttctacttcggatatg gaagtacctgaagctaagaaaaggcttttaagtgaatcagatgcagcagttgataaaata gaaaaaatgtatagaagaggttttatatcagaagatgaaagatatcagagagttatagaa agatggactaaaactacagaagatgtagcagatgagcttatgaataatttggataaattt aaccctatatttatgatggcagattcaggagctagaggttctaaaagtcaaattaaacag ctagcagggatgagaggacttatggctaatccatcaggaaaaataatagaacttccaata agggcatcttttagggaaggattagatgtattagaatattttatatcaactcatggagca agaaaaggaaatgcagatactgctttaaaaactgcagattcaggatatctgactagaaga cttgttgatgtaagccaggatgttatagttagagaagaggattgtggcacttatgaagga tatgatgtttcagaaataaaagaaggcaatgaagtaatagaaagtttgtcagaaaggctc acaggaagatattctgcagaagatattatagatcctaataatcaccaaataatagtacca aaaaatagttatatggattcaaaattagcagataggatagaagcttcaggaattaaaaaa gtaaagataagatctgtttttacctgtaaatcaagacatggggtatgctcaaaatgttat ggaatgaatatggctactgcccagaagattgatataggcgaatccgtaggtataatagca gcgcaaagtataggagagcctggtactcagcttactatgaggactttccatacgggagga gttgcagggtcagatataacacaaggtcttccaagagttgaagaattatttgaggctagg aaacctaaaggtcttgctatagtaagtgaagtttcaggtactgtaaagatggaagagact aagaaaaaaagaagtgtttctgtaattacagataatggagaagaagtaacttatgatata ccatttggatcaagaatcaaagtgtcaaatggagatttaataagtgcaggtgatgaggta acagaaggatctgtaaatccacatgatatattaagaataaaaggggttcaaggagttaaa aattatcttctatctgaagttcagaaagtttatagacttcaaggtgttgatataaatgat aaacatcttgaagtggtaattaggcaaatgacaagaaaaattaaaatagaagaatcaggg gatacagaattattgccaggaactatgattgatatatttgattttgaagaagaaaatgca agagtagaagctagtgggggaagtgcagctcaaggtagagtggctttacttggaataact aaagcagcacttgctactgaatctttcctttctgcagcatcttttcaggaaactacaaga gtacttacagatgcagctataaaggggaagatagatccactcctaggcttaaaggaaaat gtaattattggtaaacttataccggcaggaacaggcatgactaggtatagatcaataaaa attaatacagaaaatgaagtgcaggaaaatcaattggaagcttaa

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