Clostridium kluyveri NBRC 12016: CKR_0216
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Entry
CKR_0216 CDS
T00832
Name
(GenBank) hypothetical protein
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
ckr
Clostridium kluyveri NBRC 12016
Brite
KEGG Orthology (KO) [BR:
ckr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ckr03016
]
CKR_0216
Enzymes [BR:
ckr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
CKR_0216
Transfer RNA biogenesis [BR:
ckr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CKR_0216
Prokaryotic type
CKR_0216
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
BAH05267
UniProt:
B9DYE2
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All DBs
Position
231599..232342
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AA seq
247 aa
AA seq
DB search
MGQVKNIKLVIEYDGTNYSGWQRQYNAITIQQRLEEAIEKATGEFSPVIGSSRTDAGVHA
RGFVCNFFTASKIPTSNIKMVLNTLLPEDIAVLDSKEVDSSFHSRYFTTGKEYSYTIVTG
DRPPVIGRQYVYYFRRKLDIEKIKNSCEYFIGTHDFSAFKKKGSTARSSIRTIKELTVLK
EKNIIKFNIVGDGFLYNMVRIIIGTLLEVGLGRFSIEYVKYILESKDRAKAGKPVPAKGL
CLEKVFY
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
gtggggcaagtgaaaaatataaaattggtcatagaatatgatggtacaaattattctgga
tggcagagacaatataatgctattaccattcaacagagattagaagaggcaattgaaaaa
gctacaggtgaattttcaccagttatcggttctagtagaacagatgcaggtgtacatgct
aggggatttgtgtgtaatttttttactgccagtaaaatacctacctcaaatattaaaatg
gtgttaaatacattattacctgaagatatagctgtattggattcaaaagaggtagacagt
agttttcattctagatattttacaacaggcaaagagtatagttatactatagtaacagga
gacagaccaccagttattggacggcaatatgtgtactactttagaagaaaattggatata
gaaaaaataaaaaattcctgtgagtattttatagggactcatgatttttccgcatttaaa
aaaaaaggaagtacagctagatcttctattagaactataaaagaactaacggttttaaaa
gagaaaaatataattaaatttaatattgttggagatgggtttttatataatatggtgagg
ataataattggaactcttttagaagtgggattaggaaggtttagtatagaatatgtaaaa
tatattttagaatctaaggacagagcaaaggcaggaaagcctgtaccagctaagggactc
tgcttggaaaaagtattttattag
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