Clostridium kluyveri NBRC 12016: CKR_0479
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Entry
CKR_0479 CDS
T00832
Name
(GenBank) hypothetical protein
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
ckr
Clostridium kluyveri NBRC 12016
Brite
KEGG Orthology (KO) [BR:
ckr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ckr03000
]
CKR_0479
Transcription factors [BR:
ckr03000
]
Prokaryotic type
Helix-turn-helix
Other families
CKR_0479
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
HTH_8
PAS_9
GAF
AAA_5
PAS
PAS_8
AAA_2
PAS_10
HTH_28
AAA_7
Mg_chelatase
AAA
NB-ARC
HTH_30
AAA_3
PAS_4
HTH_psq
AAA_16
HTH_23
Diguanyl_cycl_sensor
Spot_14
HTH_17
Motif
Other DBs
NCBI-ProteinID:
BAH05530
UniProt:
B9DZ55
LinkDB
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Position
518813..520711
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AA seq
632 aa
AA seq
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MFKLSTHGEIISRSFNRCIKYHMEKGIPKPKRILNSRELENLIKKNNEIIKIARPFMEIL
YDFLKKSGFSLYLGDKNGIVLTIIGDKDIVIEQAKAGIVEGADMSEKSAGTNAMGTAIFE
DSSVQISGEEHFINIFQIYTCCASVIHNEQGDIIGCLNLTGKRKLAHPHTLGLVVSAVKS
IENDLKLHKSQNELFKAYQYLNKIMNSIDFGILAVDNNGMVKAINNSACSMLGINRKYII
DKNVHKVLYNWQYILDELKSGNVYKDKEILYSDKKKRFNLNVYPIKDKSDYVTGMVVIFK
DIQNIYNLVNKYMSGSVTYTFDDIIAKSEKMINLKEQLKNISNSPSTVLIQGESGTGKEL
IAQSIHNSSDRKNKSFIAINCGAIPKNLIESELFGYEEGAFTGAKHGGRAGKFELANGGT
LFLDEIGEMPLDMQVNLLRVLQEKCITRIGGNRYIKIDVRIIAATNKNLRKEVKRGTFRE
DLYYRLNVIPIYVPPLRERDMDIKILIDYFLEIKAFKLKKPVPTMKPYIYEKLLSYNWPG
NVRELENCIENIVNMNGSTSFYFQNNPSENKQNGSYDESFKYNMCSLEEWEKRAIVNCIN
NCDGNISKASKILGINRSTLYAKIKKYEINFF
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaactatccactcatggtgaaataatcagtagatcttttaataggtgcattaaa
tatcacatggaaaaaggtatacccaaacccaaacgaatactcaacagcagggaattagaa
aacttaataaagaagaacaatgagattataaaaatagcaagaccgtttatggaaatactt
tatgattttttaaagaaatcaggtttttcattgtatcttggggataagaacgggattgta
ttaactattataggtgacaaagatatagtaatagagcaagcaaaagctggaatagtagaa
ggtgctgatatgagcgaaaaaagtgcaggtacaaatgcaatggggactgctatttttgaa
gattcatcagttcaaatttcaggcgaggaacatttcataaacatttttcagatttatacc
tgttgtgcttctgttatacacaatgaacagggagacataataggatgtctaaatctaact
gggaaacggaaacttgcccatcctcatacattgggacttgttgtatcagcagtaaagtcc
attgaaaatgacttgaaattacataaatctcagaatgaattgtttaaagcataccaatac
ttgaataaaattatgaattccatagattttggaattttagccgtagataataatggaatg
gttaaagctataaataatagtgcctgtagtatgcttggaataaatagaaaatatattata
gataaaaatgtacataaggttttatataattggcaatatatacttgatgagctaaaatca
ggaaatgtatataaggataaagaaattttatactcagataaaaagaagaggttcaattta
aatgtgtatccaataaaggataaaagtgattatgtcactggaatggtggttatatttaaa
gatattcagaatatatataatctggttaataaatacatgagcggatctgttacttataca
tttgatgatataattgccaaaagtgaaaaaatgataaatttgaaagaacagttaaaaaac
atatctaatagcccgtccaccgtattaatccagggagaaagcggcacaggtaaggagctt
attgcgcaatccatccacaatagcagtgatagaaaaaataaaagttttatagcgataaat
tgtggtgccataccaaagaacttaatagaaagtgaattgtttggatatgaagagggggca
tttacaggggcaaaacacggaggacgtgcaggaaaatttgagcttgcaaatgggggtact
ttatttttagatgaaattggggaaatgcctttggatatgcaagtaaatcttttaagggtt
cttcaggagaagtgtattaccagaatagggggaaatagatatataaaaatagatgtgaga
ataattgcagctaccaataaaaacttaaggaaagaagtaaaaagggggacttttcgtgaa
gatttatattatagattgaatgtaatacctatatatgtgccgccgctgagggaaagggac
atggatataaaaatacttatagattattttttggaaataaaagcttttaaacttaaaaaa
cctgttccaacaatgaaaccttatatatatgaaaagcttttaagttataattggcctgga
aatgtcagagaattagaaaattgtattgaaaacattgtaaacatgaatggaagtacatct
ttctatttccaaaacaatccttcagaaaataaacaaaacggctcttatgacgaaagtttc
aagtacaatatgtgttcattggaagaatgggaaaagagggcaatagtaaattgtataaat
aattgtgatggtaatatatcaaaagcttctaaaattttaggaataaatagaagtacatta
tacgcaaagataaaaaaatatgaaatcaattttttttaa
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