Clostridium kluyveri NBRC 12016: CKR_1264
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Entry
CKR_1264 CDS
T00832
Name
(GenBank) hypothetical protein
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
ckr
Clostridium kluyveri NBRC 12016
Pathway
ckr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ckr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CKR_1264
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ckr03400
]
CKR_1264
Enzymes [BR:
ckr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CKR_1264
DNA repair and recombination proteins [BR:
ckr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CKR_1264
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
Helicase_C
Zn_ribbon_PriA
AAA_30
AAA_19
T2SSE
AAA_11
PIF1
Flavi_DEAD
ADDB_N
nSTAND3
PhoH
Cas3-like_C_2
SLFN-g3_helicase
nSTAND_NTPase5
Zn_ribbon_PF0610
NPHP3_N
AAA_23
AAA_22
Viral_helicase1
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
BAH06315
UniProt:
B9E1E0
LinkDB
All DBs
Position
1406245..1408446
Genome browser
AA seq
733 aa
AA seq
DB search
MYIYAGVIVNNNFIKLDKIFTYKVPEKLKNRVEIGFRIKVPFGKGNKKLDGFIVRLYDKE
QEQIEIKEIIDICDDFSLFTKKDLELIENMREKYLCTYLECIKVFIPPGIFKGIKNKKKT
LIFIGRKLEEKFNKEPYKSIYELIKNNNGLYTKNFISKNYNISMSSLNTMIKYGFLLSDE
KIINRYNTVQYENYSRKRLNKEQQNAVDKIINSNKKLFLIHGVTGSGKTEIYMHIVEKAL
KENKESLVLVPEIVLTPQMVERFKGRFGKDISVVHSKLSEGERYDEWVRVKQGKVKVAIG
ARSAIFLPFKNLGFIIIDEEHEGSYKSDSNPKYNVREIGEMKCSQYDCKMILGSATPSVE
TYYRCKRGEIELITIENRVNGIKMPEVEIVDMREELLNNNKSMFSRALYEAICDRLIKKE
QIILFLNRRGYSTFVSCRKCGYVFKCNNCDISFTYHYDKKKLMCHYCGSVTDIPKMCPKC
FSKYVKYFGLGTEKVEQEIKKLFPEANILRMDFDTTRNKNSYENIYNRFKNKQADILIGT
QMVAKGLDFKDVTLVGVIAADVSINLPDFRAAERTYELITQVSGRAGRGEKSGKVIVQTY
NPENYSIRCAASNDYKSFYQEEISIRQNMEYPPFVDLLLINMSSKNENLLIKNIQNVGIF
LKNMWEKNDKITLLGPCPCQISKIKELYRWQIILKGQIRRDDAKNVRKTVYHLLKHVYND
IRVSIDMNPNNML
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
gtgtatatatatgcaggtgtaattgtaaataacaatttcataaaattagataaaattttt
acctataaagtaccagaaaaattaaaaaacagagtagagataggttttagaataaaggtt
ccttttggtaagggaaataaaaaattggatgggtttatagttagactctatgataaagag
caggaacaaatagagattaaagagattattgatatctgtgatgatttttcacttttcact
aaaaaggatctagaacttatagaaaatatgagggaaaaatatttatgtacgtatcttgag
tgtataaaagtatttataccaccaggaatatttaaaggtataaaaaataagaagaaaact
ttaatttttatagggaggaaactagaagaaaaatttaataaagaaccttataagagtatt
tatgaattaataaagaataataatggtctatatactaaaaattttataagtaaaaattac
aatatatcaatgtcatctctaaatactatgataaaatatggctttcttttatcagatgag
aaaattataaatagatataatacagttcaatatgaaaattattcaaggaaaagactaaat
aaagaacaacaaaatgcagtagataaaataataaattccaataaaaagctatttttaatt
catggagttacaggaagtggcaaaactgaaatttatatgcacatagttgaaaaagctttg
aaagagaataaggaatccttggtattggtgcctgagattgtactcacccctcaaatggtt
gaaagatttaaaggtagattcggaaaagatattagtgtggttcacagcaaactttcagaa
ggtgaaagatatgatgaatgggttagagtaaaacagggaaaggtgaaggttgccataggt
gcaagatctgcaatttttcttccatttaagaatttaggctttataataatagatgaggaa
catgaaggaagttataaatcagacagcaatcccaaatataatgttagagaaataggggaa
atgaagtgcagtcaatatgattgcaaaatgatactaggttcagctacaccttccgtagaa
acttattatagatgtaaaaggggagaaattgaacttataactatagaaaatagagtaaat
ggaataaaaatgcctgaagtggaaattgtggatatgagagaggagcttttaaataataac
aagtccatgtttagcagagctttgtatgaggctatttgtgatagactaataaaaaaggaa
caaataatattatttttaaatagaagaggatattccacctttgtatcctgtagaaaatgt
gggtatgtttttaaatgtaataattgtgatatatcctttacctatcactatgataaaaaa
aagctcatgtgtcactactgtggaagtgtaactgatataccaaagatgtgtcctaaatgt
tttagtaaatatgtaaagtattttgggcttggaacagagaaagtagaacaggaaataaaa
aaattgtttccagaggctaatatacttagaatggattttgataccacaagaaataaaaat
tcttatgagaatatttataacagattcaaaaataaacaagcagatatattaataggtact
caaatggtagccaagggtttggactttaaagatgtgactctcgtaggtgttatagcagca
gatgtgtccattaatctaccagactttagagcagcagaaaggacttatgagcttataact
caagtttcaggaagagctggaagaggagaaaagtcgggaaaagtaattgttcaaacttat
aatcctgaaaattacagtataagatgtgcagctagtaatgattataagagcttttatcag
gaagaaatcagcataaggcaaaatatggaatacccaccctttgtagatttgcttcttata
aatatgagtagtaaaaatgagaatttattaataaaaaatatacaaaatgttggcatattt
ttaaaaaatatgtgggaaaagaatgataaaattacactactaggtccttgtccctgccaa
atatcaaagataaaggaattatacagatggcagataatattaaagggacaaataagaaga
gatgatgcaaaaaatgttagaaaaacagtttatcatttgttgaaacatgtttataatgat
ataagagttagtatagatatgaatccaaataatatgttgtag
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