Clostridium kluyveri NBRC 12016: CKR_1310
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Entry
CKR_1310 CDS
T00832
Name
(GenBank) hypothetical protein
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ckr
Clostridium kluyveri NBRC 12016
Brite
KEGG Orthology (KO) [BR:
ckr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ckr03032
]
CKR_1310
03400 DNA repair and recombination proteins [BR:
ckr03400
]
CKR_1310
Enzymes [BR:
ckr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CKR_1310
DNA replication proteins [BR:
ckr03032
]
Prokaryotic type
DNA Topoisomerases
CKR_1310
DNA repair and recombination proteins [BR:
ckr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CKR_1310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_recom
DmmA-like_C
Zn_ribbon_3
Zn_ribbon_GRF
Toprim_4
HypA
Aegerolysin
HVO_2753_ZBP
Motif
Other DBs
NCBI-ProteinID:
BAH06361
UniProt:
B9E1I6
LinkDB
All DBs
Position
1451917..1454010
Genome browser
AA seq
697 aa
AA seq
DB search
MGQKLVIVESPAKAKTIGKYLGKNYVVEASMGHVRDLPKSQLGVDIDNEYNPKYITIRGK
GEILDKLRKQAKKSEKIYLATDPDREGEAISWHLSHVLKLDENEKCRIEFHEITKNAVKN
SIKSAREININLVNAQQARRILDRLVGYKISPILWRKVKWGLSAGRVQSVALKLICEREK
KILSFAPEEYWTIECMLHKKDESKCFNVRLTTLNKKKIEISNKDEVDKIIKELESGDFIV
KSIKNTSKNKNPLPPFITSTLQQDAYKKLNFSTKRTMSIAQQLYEGVDIKGHGTIGLITY
MRTDSVRISKEAQQVCRDFIVNQFGKEYVESKPRNFKSKKNIQDAHEAIRPTNIEITPDK
AKADLKPDQYKVYKLIWDRFVASQMASAKIDVTSIDIVNNNYGLRVGGSKISFYGFMKVY
QYVTEEEKLDIVLPKLEEGELLLKKSIDGKQHFTQPPARFSEASLVKTLEENGIGRPSTY
APILSTLLDRKYIQREKKTLIPTELGDIVNNIVSEYFKQVVDVEFTAEIESKLDNIEEGK
DNWTKVVGKFYEPLKKAIEIAEKEVARITIEDKVTDIKCDKCGRNMVIKHGRFGDFLACP
GYPECKNTKPIVEELDVKCPKCGEKILVKKSRKGRKFYGCSSYPDCDFVSWLEPTNEQCP
LCHSYMVKKYSKAKGNYLECSNSECKHKDYKELEDNK
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgggacaaaaattagttatagttgaatcaccggcaaaagctaagaccataggaaaatat
ttaggcaagaattatgtagtagaagcttcaatgggccatgttagagatcttcccaagagt
caattgggagttgatatagataatgagtataatcctaaatatataactataagaggaaaa
ggagaaatattagataaactcagaaaacaggcaaaaaagagtgaaaaaatatatttagct
acagacccagatagagagggagaggctatttcatggcacttatctcatgttctgaagtta
gatgagaatgaaaagtgtagaatagaatttcatgagattactaaaaatgctgtaaaaaat
tctataaaatctgcaagagaaataaatataaatttggttaatgctcaacaggctagaaga
atattggatagattagtgggatataaaataagtccaatactctggagaaaagttaaatgg
ggattaagtgcaggtagagtacaatctgtagcacttaagttgatatgtgagagagaaaag
aagatactaagttttgcacctgaagaatattggactatagaatgtatgcttcataagaag
gacgaaagcaaatgttttaatgtaagacttactactttaaataaaaaaaagattgaaatt
tctaataaagatgaagtggataagatcattaaggagctggaaagtggggacttcattgta
aaatccattaaaaatacttctaaaaataaaaatcctcttcctccatttattacaagtact
cttcagcaagatgcatataaaaaattgaatttttccacaaagagaactatgtccatagca
caacagctttatgaaggagtggacataaaaggccatggaactatagggcttataacttat
atgagaactgattctgtaagaatttctaaagaagcccaacaagtctgtagagattttata
gtaaatcagtttggaaaggaatatgttgaatccaagcctaggaattttaaaagtaaaaaa
aatatacaggatgctcatgaggccataagacctactaatatagagataacaccagataaa
gccaaggcagatttaaaaccagatcagtataaggtatataaattgatatgggacagattt
gtggccagccaaatggcttctgcaaaaattgatgttacatctatagatatagttaataat
aattatggattaagagttggaggttctaagataagtttttacgggtttatgaaagtatat
cagtatgtaacagaggaagaaaaattagatatagtcctaccaaaattagaagaaggagaa
cttctattaaaaaaatccatagatggaaaacaacattttacacagccgccggctagattt
tcagaagcatccttggtaaaaactcttgaagaaaatggtataggtagacctagcacctat
gctcctattttatctactcttctagatagaaaatatatacaaagggaaaagaagactctg
attccaacagaacttggagatatagtaaataatatagttagtgaatattttaaacaggta
gtagatgtggaatttactgctgaaatagaatctaaactagataatattgaagaaggaaag
gataactggactaaagtagtagggaaattttatgaacctttaaaaaaagctattgagata
gcagaaaaagaagttgcaagaattaccatagaagataaagttacggatataaagtgtgac
aaatgtggaagaaatatggttataaagcatgggagatttggagatttcctagcatgtcca
ggttatccggagtgtaaaaatacaaaacctatagtagaagaactggatgttaagtgtcct
aaatgtggagagaagattttagtaaagaaaagcagaaaaggtagaaaattttatggatgt
agttcttatccggattgtgattttgtaagttggctggaacccacaaatgagcagtgtcct
ttgtgtcacagttatatggttaagaaatatagtaaagcaaaaggaaattatttagagtgt
tctaattcagaatgtaaacacaaagattacaaagaattagaagataataaataa
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