Clostridium kluyveri NBRC 12016: CKR_1332
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Entry
CKR_1332 CDS
T00832
Name
(GenBank) hypothetical protein
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ckr
Clostridium kluyveri NBRC 12016
Pathway
ckr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ckr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CKR_1332
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ckr03019
]
CKR_1332
03016 Transfer RNA biogenesis [BR:
ckr03016
]
CKR_1332
Enzymes [BR:
ckr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CKR_1332
Messenger RNA biogenesis [BR:
ckr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CKR_1332
Transfer RNA biogenesis [BR:
ckr03016
]
Prokaryotic type
tRNA degradation factors
CKR_1332
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
PNPase
RNase_PH_C
KH_1
KH-I_KHDC4-BBP
PCB_OB
S1_2
Motif
Other DBs
NCBI-ProteinID:
BAH06383
UniProt:
B9E1K8
LinkDB
All DBs
Position
1476708..1478855
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AA seq
715 aa
AA seq
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MRGGKFLMNEVIQTTVAGRTLKVDCEKVGMLSNCGMLISYGDTVVLINANASDKPREGID
FFPLSIEYEERLYSVGKIPGGFIKREGKPSEKAILNARAIDRPLRPLFPKGYRNDVQVVC
TVLSVDQDNLPNIVAMNGASLALCISSIPFITPVGSVAVGLVDGNFIINPNLEDREKSTL
NLTVCATKERVMMVEAGACEVPEDIMYDAIIFGFEECKKIALFQEEVMKKYGKKKDEPDL
YKVNEDLEEEVRGFAFDMIKDAMYIVDRDERNKVLKDIDEKLEEQFSEDYADNKSDIADV
VYRVKKEIVRGMLLKEHRRVDGREFDEVRPISCEVGFLPRAHGTGLFTRGLTQVMTVVTL
GSLGDVQILDGVGLEDSKRYMHHYNFPSYSTGEVRPLRGPGRREIGHGALAEKALEPLIP
MEEQFPYTIRLVSEVLSSNGSTSQASICGSTLALLDAGVPIKRPAAGIAMGLVTSEDLSQ
EEILTDIQGLEDFFGDMDFKVGGTEKGITAIQFDTKIHGLSNKCIKETLEKARTARLYIL
EKMKQCIPEHRAEVSKYAPKTYIMSIPPDKIRDVIGSGGKVINKIIAETGVKIDIKEDGK
IFVMSEDSEGAKKALKIIDDLTREILVGEIYLGKVTKITNFGAFVEIHKGKEGLVHISKL
DFTRVNKVEDIVSVGDEILVKVIEIDNQGRINLSRKDAIKDSEKKEQNEKDVQKK
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
ttgagaggagggaaatttttaatgaatgaagttattcaaactactgtagcaggaagaact
ttgaaagttgactgtgagaaggtaggtatgttgtctaattgtggtatgctcataagctat
ggtgatacagtggttttaatcaatgcaaatgcttcagataagccaagagaaggaatagat
ttttttcctttaagtatagaatatgaagaaaggttatattctgttggaaagattccagga
ggatttataaaaagggaaggtaagccctcagagaaggcaatattaaatgcaagggcaata
gacagacctcttagaccgttattcccaaaaggatatagaaatgatgttcaggtagtgtgt
acagtattatctgtagatcaggataatttacccaatatagtggctatgaatggagcatct
ttagcactttgtatatcaagtattccttttataactcctgtaggctctgtagctgtgggg
ttagtggatgggaattttataataaatcctaatttggaggatagagaaaaaagtactttg
aatcttactgtatgtgctactaaagagagggtcatgatggtagaagctggagcatgtgaa
gtgccagaggatattatgtatgacgccataatttttggttttgaggaatgcaagaaaata
gccttatttcaagaagaggttatgaaaaaatatggtaagaaaaaagatgaacctgattta
tataaggtaaatgaagatttagaagaagaggtaagaggatttgcttttgatatgataaaa
gatgctatgtatatagtagatagggatgagagaaataaggttttaaaagatattgatgaa
aaattagaagagcagttttctgaagattatgcagataataaaagtgacatagctgatgta
gtgtatagagtaaaaaaggaaatagttagaggtatgctgcttaaagaacatagaagagta
gatggaagggaatttgatgaggtacgtcctataagctgtgaagtaggatttcttccgagg
gcacatggcacagggttgtttactagaggattgactcaggtgatgactgttgttacattg
ggatctttaggtgacgtacaaatacttgatggagtgggtcttgaggattctaaaagatat
atgcatcattataattttccatcttacagcaccggggaagttagacctctaagaggacct
ggaagaagagaaataggccatggcgcattggctgagaaagcactggaaccacttatacca
atggaagaacaatttccttataccataagacttgtatcagaagttctaagttccaatggt
tctacatctcaagctagtatatgtggaagtacactggcacttttagatgcaggtgttcct
ataaaaagacctgcggctggaatagctatgggacttgtaaccagtgaagacttatctcag
gaagaaatattaacggatatacagggattggaagactttttcggtgatatggattttaaa
gttggaggaacggaaaaaggtatcacggctattcagtttgatactaaaattcacgggtta
tccaataagtgtataaaagaaactcttgaaaaagcaagaacagctagattatatatactt
gagaagatgaaacaatgtattccagagcatagggcagaagtatcaaaatatgcaccaaag
acctatataatgtctatacctcctgataaaataagagatgtaataggatccggaggaaaa
gttatcaataaaataatagcagaaactggagttaaaatagatataaaagaagatggaaaa
atatttgttatgtcggaagatagtgaaggtgctaaaaaagcattgaaaataatagatgat
cttactagggagatactggtgggggaaatatatttgggcaaggttactaaaataactaac
tttggagcttttgtggaaatacacaagggaaaagaaggactagtccatatatcaaagtta
gattttacaagagttaataaagtagaagatatagtttctgtaggagatgaaatattagtt
aaagtaattgaaatagataatcagggaagaataaatctttccagaaaagatgctataaag
gattcagaaaagaaagaacaaaatgagaaggatgtacaaaaaaagtag
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