Clostridium kluyveri NBRC 12016: CKR_1338
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Entry
CKR_1338 CDS
T00832
Name
(GenBank) hypothetical protein
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
ckr
Clostridium kluyveri NBRC 12016
Brite
KEGG Orthology (KO) [BR:
ckr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ckr03009
]
CKR_1338
Enzymes [BR:
ckr01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
CKR_1338
Ribosome biogenesis [BR:
ckr03009
]
Prokaryotic type
ribosomal protein modification factors
CKR_1338
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GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TMF_TATA_bd
23S_rRNA_IVP
Motif
Other DBs
NCBI-ProteinID:
BAH06389
UniProt:
B9E1L4
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Position
1485427..1486782
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AA seq
451 aa
AA seq
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MGGDLVDKLKVGLISLGCDKNRVDSEIILGNVKSAYEIVTDPKLADFIIINTCGFIESAK
QESIDTILEMSQYKGKYNCRGIVVTGCLAQRYGIELMELLPEIDIMLGVNDYDKLVENIN
NFISDKQNKIHNCGYSDLNINEGKRILTTKSHTAYLRIAEGCDNYCTYCIIPKIRGKYRS
RSIENILQECNELSLRGVKEVILIAQDTTRYGIDLYNKKMLPELMRSISKIEGIEWIRLL
YCYPEEITEDIIDEIALNDKVCNYIDIPLQHISDNILKLMGRRGRKKDILRNINELRKKI
NDISIRTTIIVGFPGESEEDFKELKNFIENIKFDNLGVFKYSREEGTRAYKMKDQVSEEL
KTAREGELMMLQKHIIYSMQKYKIGNKYKVLVEGKKEGVWYGRNYAMAPDIDGVIYIKSK
KELKVGTMIDVKITNSVEYDLVGVVYDESGK
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgggaggagacttagtggataaattaaaagttggactaataagtttaggctgtgataaa
aacagagtggattctgagataatactaggcaatgtaaagtccgcctatgaaatagttaca
gatcctaagttggcagattttataattataaacacctgtggttttatagaatcggcaaag
caggagtctatagatactatacttgaaatgtcacagtataagggaaaatataattgcagg
ggtattgtagtaacaggatgtcttgcacagagatacggcatagaacttatggaactgtta
cctgaaatagatataatgcttggagtaaatgattatgataagctggtagaaaatataaat
aactttataagtgataaacaaaataaaattcataattgtggatatagtgatcttaacata
aatgaaggtaaaagaatacttacaaccaagtctcatacggcctatttaagaattgcagaa
ggatgtgataattactgtacttattgtataatccctaaaataaggggaaagtacagaagt
agaagtattgaaaatatattacaagagtgtaatgaattatcacttaggggagttaaagaa
gtaatacttattgcacaggatactacaagatatggaatagatttgtataataaaaaaatg
cttcctgaacttatgagaagtatatcgaaaattgaaggaatagagtggattaggctgctt
tattgttaccctgaagaaataacggaagatattatagatgaaatagccctaaatgataaa
gtatgtaattatatagatattcccctgcagcacataagtgataatatattaaaacttatg
ggcagacgcggcaggaaaaaagatatattaagaaatataaatgaacttaggaaaaaaata
aatgatatctcaattagaactactataatagttgggtttccaggagaaagcgaagaagat
tttaaagaattaaagaattttatagaaaatattaagtttgataatctgggagtatttaaa
tattccagggaagaaggaactagagcgtataagatgaaagatcaagtttcagaagaatta
aagaccgcaagagaaggggagcttatgatgctccagaaacatattatatattccatgcaa
aaatacaagattggaaataagtataaagtacttgtggagggaaaaaaagaaggtgtatgg
tatggaagaaactatgcaatggctccagacatagatggagttatatacataaaaagtaaa
aaggaactaaaagtaggtactatgattgatgtgaaaattacaaatagtgttgaatatgat
ttggtgggagttgtatatgatgaatctggcaaataa
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