Clostridium kluyveri NBRC 12016: CKR_1341
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Entry
CKR_1341 CDS
T00832
Name
(GenBank) hypothetical protein
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
ckr
Clostridium kluyveri NBRC 12016
Pathway
ckr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ckr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CKR_1341
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ckr03019
]
CKR_1341
Messenger RNA biogenesis [BR:
ckr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CKR_1341
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH_2
Motif
Other DBs
NCBI-ProteinID:
BAH06392
UniProt:
B9E1L7
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All DBs
Position
1488907..1490451
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AA seq
514 aa
AA seq
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MNYMIIYEIIAGILIVVAILIHFNIMKNKVAAIKSQTIYESNRLKEEAKKEAQSQKKEAI
LEAKEEVHKLRNDLERESRDRRMEIQRLEKRVLQREELLDKKNDVLEKRESSLDKKQQEI
DKVQAKVEELYQKQREELERLSGLSSEEAKDILLEEVNKEIKHESAMMIKEVETKAKEEA
DKRAREIITSAIQRCAADHVAETTVHVVTLPNDEMKGRIIGREGRNIRTLETLTGVDLII
DDTPEAVILSGFDPIRREVARIALEKLIIDGRIHPARIEEMVEKAEKELENDIKEEGEQA
TFETGVHGLHIELIKLLGRLKYRTSYGQNVLKHSVEVAYLAGLMASEIGIDPTIAKRAGL
LHDIGKAVDHEVEGPHAVIGAEIAKKYRESPVVVNAIGAHHGDLEFQSLEDVLVQAADAI
SAARPGARRETLEAYIKRLEKLEKIANTCEGVEKSYAIQAGRELRIMVKPEDIDDAGALE
MARNIVKKIEEELEYPGQIKVNVIRETRAIEYAK
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
gtgaattacatgataatatatgaaattattgctggtatactaatagttgttgctatatta
attcattttaatataatgaaaaataaagtagctgctataaaatcacagactatttatgag
tctaatagattaaaggaagaggcaaaaaaagaagctcaatcccaaaaaaaagaagctata
ctggaggctaaagaggaagttcataaattaagaaatgatttggaaagagaatctagagat
agaagaatggaaattcaaaggctagaaaaaagagtattgcaaagagaagaattattagat
aagaagaatgatgtccttgaaaagagagaaagtagcctggataaaaaacaacaggaaatt
gataaagtgcaggcaaaagtagaagaattataccagaagcagagagaagaacttgaaagg
ttatcaggtttgagttctgaagaggctaaggatatcttgttagaagaggttaataaagaa
ataaaacatgaatctgctatgatgattaaagaagttgaaacaaaggctaaagaagaagcg
gataaaagggcaagggaaattataacttccgctattcaaagatgtgcagcagatcatgtg
gcagaaactacagtacatgttgtaacgcttcctaatgatgaaatgaagggaaggataata
ggtagagaaggtagaaatataagaacccttgaaactttaacaggtgtagatttaataata
gatgatacacctgaagctgtgatattgtcgggttttgatcctataagaagagaagttgct
agaatagcattggaaaaacttataattgatggaagaatacatccggcaagaattgaagaa
atggttgaaaaagctgaaaaggaattggaaaatgatattaaggaagaaggggaacaagca
acttttgaaactggtgtacatggtcttcatatagaattaataaaattgctaggaaggttg
aaatatagaactagttatggtcagaatgttttgaaacactcggtggaagttgcatatcta
gctggacttatggcatcagagattggaatagacccaactatagcaaaaagagcaggatta
cttcatgatataggcaaagcagtggatcacgaagttgaaggaccacatgctgttataggg
gcagaaattgctaaaaaatacagagaatcacctgtagttgtaaatgccattggagctcac
catggagacttggaattccaatccttagaagatgtacttgttcaggcagcagatgctatt
tcagcagcaaggcctggagctagaagggaaacattagaagcatatattaagcgtttggaa
aaattagaaaaaatagcaaatacatgtgaaggcgtagaaaagtcatatgccattcaagcg
ggaagagaacttagaattatggttaaaccagaagatattgatgatgcaggagcccttgaa
atggcaaggaacatagtaaagaaaattgaggaagaactagagtatcctggccagattaag
gtaaatgttattagagaaactcgtgcaattgaatatgcaaaataa
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