Clostridium kluyveri NBRC 12016: CKR_1363
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Entry
CKR_1363 CDS
T00832
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ckr
Clostridium kluyveri NBRC 12016
Pathway
ckr03420
Nucleotide excision repair
ckr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ckr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CKR_1363
03430 Mismatch repair
CKR_1363
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ckr03400
]
CKR_1363
Enzymes [BR:
ckr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CKR_1363
DNA repair and recombination proteins [BR:
ckr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CKR_1363
MMR (mismatch excision repair)
Other MMR factors
CKR_1363
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
Viral_helicase1
UvrD_C_2
AAA_11
DEAD
ResIII
PRK
AAA_14
CarD_TRCF_RID
NTPase_1
GpA_ATPase
Motif
Other DBs
NCBI-ProteinID:
BAH06414
UniProt:
B9E1N9
LinkDB
All DBs
Position
1511393..1513405
Genome browser
AA seq
670 aa
AA seq
DB search
MINNLDVNQIKAVNTNFKNVVICAPPGSGKTTVIINRINYLITQKNIKPKNIVVITFTRA
SALDMKYRYLSIMNKNPLPFFGTFHSLFYNILKRYKGEINMVESSKAYSLISSVLMRYIG
FVEEEKVKEVLNDISLFRSSSKSMEYFNSKIDKTVFIYCIGEYEKYKSKNNLMDFDDLQL
EVKNILETDKNILKYYSNLFTYILVDEFQDCDRLQIDILKLIGKNSSVFAVGDEDQCIYG
FRGSHPICMVDFNRYFEEGQKLFLKKNYRSVYNVVKMSQNLICNNKNRNLKCVESSRMNR
GNINFKIFESEKEQACYLAHIIKQIIEAGKCRCRDIALLYRTNIECVNIIDSLLKNDIKF
KFLHGKYNFYSHFICKDLICYFKLALDMCDKESFISIVNKPFRYIGKINIEKVRNNRVKE
NCFEILKNIEGIPVFQIKAIDKLQRNIKKLRKIKPKERVKFILDKLEYKDYLHKHCEKLA
SNMEEYYYVIEQFKQICEDFTSIYEFLKHVETAEEFLHKNLQEEDAVILSTLHGVKGMEF
KNVFIINCNEGSIPHSNSILNNLEEERRLFYVGITRAIDNLYLCSTSTIKGRAVEVSRFI
RECNLADLEGVNSLFNLKIGDLVVHKVFGQGKVTEREDKRVSILFSDNIERSFCSSVLYS
GQLSQRGGAL
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgataaataatttagatgtaaatcaaataaaggcagttaatacaaattttaaaaatgta
gtaatttgtgcccctccgggttctggcaaaactacagttattataaataggataaattat
ttaataacccaaaaaaatataaaacctaaaaatatagtggtaataacctttaccagggct
tctgcccttgatatgaaatacagatatctttcaattatgaataagaatccactacctttt
tttggtacttttcattctctattttataatatattgaaaagatataaaggggaaataaac
atggtggaatcttccaaagcctatagtttgattagctctgtacttatgcgttatatagga
tttgtagaagaagaaaaagtaaaagaagtcttaaatgatatatcactttttagaagtagt
agtaaaagcatggaatatttcaacagtaaaattgataaaactgtgtttatatattgtatt
ggagaatacgaaaaatataagtctaaaaataatttaatggattttgacgatttgcagctg
gaggtaaaaaatattttagaaacagataaaaatatacttaaatattatagtaatttattt
acatacatactggtagatgaatttcaagattgtgacagacttcaaatagatattttaaaa
ttaattggtaaaaatagttccgtatttgcagtgggagatgaagaccagtgtatatatggc
tttagaggatctcatcccatatgtatggtggatttcaacaggtattttgaagaaggtcaa
aaattgttcttaaagaaaaattacagaagcgtatataatgtagttaaaatgtctcaaaat
ttaatatgtaataataaaaatagaaatttaaaatgtgttgaaagcagtagaatgaacaga
ggaaatattaattttaaaatttttgaaagtgagaaggaacaggcctgttatttagcccat
attataaaacaaattatagaggcaggaaaatgcagatgcagggatatagcccttttgtac
cgtactaatatagagtgtgtcaatataatagacagcttattaaaaaatgatataaaattt
aaatttttgcatggaaagtataatttttatagtcattttatttgcaaggatttaatatgt
tattttaagctagccctggatatgtgcgataaagaaagttttataagtatagtaaataag
ccttttagatacataggaaaaataaatatagaaaaagtcagaaataatagagtgaaggaa
aattgttttgagattttaaaaaatatagaaggaatacctgtttttcagattaaagccata
gataagcttcaaagaaatataaaaaaattgagaaagataaaacctaaagaaagggtaaaa
tttatattggataaattggaatataaagattatctacataaacattgtgaaaaattagct
tctaatatggaagagtactattatgttatagagcaattcaaacaaatatgtgaagacttc
actagtatttatgaatttttaaaacatgttgaaactgcagaagaatttttgcataaaaat
ttacaggaggaagatgcagttatattaagtactctccacggagtaaaggggatggagttt
aaaaatgtatttataataaactgtaatgaggggtcaattccacactcaaatagtatttta
aataatttggaagaggaaaggcgacttttttatgtaggaattaccagggccatagataat
ttatatttatgctctacaagtaccataaaaggcagggcagtggaagtatccagattcata
agggaatgtaacctggctgatttggaaggggttaattcactgttcaatcttaaaatagga
gatttggtggttcataaagttttcggccagggaaaagtaactgagagagaagataaaagg
gtaagcatattattttcagacaatattgaaagaagcttttgtagttcggtgctttatagt
ggacagttaagtcaaaggggaggtgctttataa
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