Clostridium kluyveri NBRC 12016: CKR_2141
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Entry
CKR_2141 CDS
T00832
Name
(GenBank) hypothetical protein
KO
K06236
collagen type I alpha
Organism
ckr
Clostridium kluyveri NBRC 12016
Pathway
ckr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ckr00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
CKR_2141
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ckr00536
]
CKR_2141
Glycosaminoglycan binding proteins [BR:
ckr00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
CKR_2141
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
CBM96
Disaggr_repeat
Motif
Other DBs
NCBI-ProteinID:
BAH07192
UniProt:
B9E3W7
LinkDB
All DBs
Position
complement(2437622..2440171)
Genome browser
AA seq
849 aa
AA seq
DB search
MPVIQVNPSDDAYISQLNPNTNFSNSSLLFTGEFVQPNDVFRSLLKFDLSNVIPPGSSVL
QASLELFVFRKDMPDAVLSPQTVNVFTNASGFSENTVTWNNAPSLNPTTYSVNVTDSDVG
NFISIDITDLVGSWIDGSIINNGVTLVGIESAIDTIIGYFSKEWTVPSQRPFLNIEYGTL
VPTGITGPTGPTGDTGPTGPTGDTGATGATGDTGPTGATGETGPTGATGDTGATGATGDT
GPTGATGDTGATGATGATGATGDTGATGATGDTGATGATGDTGPTGATGDTGATGATGDT
GATGATGDTGPTGATGDTGATGATGDTGATGATGDTGPTGATGDTGATGATGDTGDTGAT
GDTGPTGATGDTGATGPTGATGDTGPTGATGDTGATGATGDTGATGATGDTGPTGATGDT
GATGDTGATGATGDTGATGATGATGDTGATGATGDTGPTGSTGDTGATGATGDTGATGAT
GDTGATGATGDTGATGSTGDTGATGATGDTGPTGATGDTGATGATGDTGATGATGATGDT
GPTGATGETGATGVTGDTGPTGPTGETGATGPTGPTGPTGATGDTGATGDTGPTGATGDT
GPTGPTGDTGPTGATGAAGVGLSSAVQFDPIEAPNYPLDQVVEYNGSLYIVTSVPSSGTP
DTSPDYNLLVSAGAAGVTGDTGPTGATGPNVSEEGFSAFISTLDISASTQLTGWTVDSPF
FDNTSFDETTGNYTVPETGVYSIKATINYSTTAAISVAIGAGVNPAFVVRRTSPTTEDLI
SGLFPVLNIAVVVLTLRGVLGSGTVTLAGEVELNAGDVIGLFYEANGLTIGLDLGGPSTG
IVWSVYRLT
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atgccagttatacaagttaatcctagtgatgatgcatatatatctcaattaaatcctaat
acaaattttagcaattcaagccttttatttacgggagaatttgttcagcccaacgatgta
tttaggagtttattaaaatttgatttatctaatgttattcctccaggaagtagcgtattg
caagcttcactagagttatttgtttttagaaaagatatgcctgatgcagtgttatcacct
caaactgtcaatgtatttacaaatgcaagtggtttttcagagaatacagttacgtggaat
aatgcaccttcattgaatcccacaacctattctgtgaatgtaacagatagtgatgttggt
aattttattagtattgatataacagatttagtgggtagctggatcgacggctctattata
aataatggagtcacattagttggaatagaaagtgctattgacactataataggatatttc
tccaaagaatggacagttcctagtcagagaccatttttaaatatagaatatggtacatta
gtacctactggtattacgggaccaacaggtccaacaggagacacaggaccaacaggtcca
acaggagacaccggagcaactggagcaaccggtgacacaggtccaactggggcaacggga
gaaacgggcccaacaggagcaacgggagatacaggagcaacgggagcaacaggagatacg
ggtccaacgggagcaacaggagatacaggagcaacaggagcaacaggagcaacaggagca
acaggagacacgggagcaaccggagcaacgggagatacaggagcaaccggggcaacagga
gacacaggcccaactggggcgacaggagacacgggagcaactggggcaacgggagatacc
ggagcaactggggcaaccggtgacacaggtccaacaggagcaacaggagatacaggagca
actggggcaacaggagacacaggagcaactggagcaaccggagacacgggtccaacagga
gcaacaggagacactggggcaacaggagcaacgggagacacaggagataccggagcaacc
ggtgacacaggaccaacaggagcaacaggagacactggagcaacaggaccaacaggagca
acaggagacacgggtccaactggagcaaccggagatacgggagcaacaggagcaacggga
gacaccggagcaacaggagcaacaggagacacgggtccaacaggagcaacaggagataca
ggagcaacaggagacactggggcaactggggcaacaggagacaccggagcaaccggggca
acaggagcaacgggagacacaggagcaactggggcaacaggagacacaggcccaaccgga
tcaacaggagacactggggcaacaggagcaacgggagataccggagcaacaggagcaaca
ggagacacaggagcgaccggagcaaccggagatacgggagcaactggatcaacaggagac
acaggagcaaccggggcaaccggagatacgggaccaaccggagcaacaggagacacagga
gcaaccggagcgacaggagacacaggagcaaccggagcaacgggagcaacaggagataca
ggtccaactggggcaacaggcgaaacaggagcaactggagtgacaggagatacgggacca
accggaccaaccggcgaaacaggtgcaactggcccaacgggaccaacaggtccaactgga
gcaacaggagatacaggagcaacaggagacacaggaccaactggagcaacaggagacaca
ggcccaacgggaccaacaggagacacaggcccaacaggtgcaaccggagcggcaggagta
ggattatcttcagcagtacaatttgatccgatagaagcaccgaactatccacttgaccag
gttgtagagtataatggaagtctttatatagtaacttcagttccatcatctggaacacca
gatacttcaccggattataatcttttagtatctgcaggagcagcgggagtaactggagat
acaggtccaacaggagcaacaggtccaaatgtatcggaagaaggtttttcggcatttatt
tctacacttgatatttctgcaagtacgcagttaacaggatggactgtcgattctccattc
tttgataataccagctttgacgaaactacaggaaattacactgttcctgaaactggagta
tattctattaaagctacaattaattattctaccactgcagctatatcagttgctattggg
gccggtgtaaatcctgcctttgtagttagaagaacttctccaacgactgaggatttaatt
agtgggctgtttcctgtattaaatatagctgtagttgtattaacattaagaggagtgttg
ggaagcggtacggttactttggcaggtgaagttgaattgaatgcaggagatgttatagga
cttttctatgaagcaaatggcttaacaataggtcttgaccttgggggtccttcaacaggt
attgtatggtctgtatatcgactgacctaa
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