Clostridium kluyveri NBRC 12016: CKR_2673
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Entry
CKR_2673 CDS
T00832
Name
(GenBank) hypothetical protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ckr
Clostridium kluyveri NBRC 12016
Pathway
ckr00061
Fatty acid biosynthesis
ckr00071
Fatty acid degradation
ckr01100
Metabolic pathways
ckr01212
Fatty acid metabolism
ckr02024
Quorum sensing
ckr04146
Peroxisome
Module
ckr_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ckr00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
CKR_2673
00071 Fatty acid degradation
CKR_2673
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
CKR_2673
09145 Cellular community - prokaryotes
02024 Quorum sensing
CKR_2673
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ckr01004
]
CKR_2673
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ckr04147
]
CKR_2673
Enzymes [BR:
ckr01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
CKR_2673
Lipid biosynthesis proteins [BR:
ckr01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
CKR_2673
Exosome [BR:
ckr04147
]
Exosomal proteins
Exosomal proteins of breast milk
CKR_2673
Exosomal proteins of breast cancer cells
CKR_2673
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
DacZ_A
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
BAH07724
UniProt:
B9E5E9
LinkDB
All DBs
Position
complement(3006453..3007922)
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AA seq
489 aa
AA seq
DB search
MTFTDYVFEEFKDSDKIAVIDKNKISYREIYGGVNYVTYLLQENGCSKENSVLVISDNSV
FFIKTYFGIIKNGSICVPVNPTISENDMRYIMDILKIKIVFCQKKYRNKVDKIVCRDTMV
YSEESIWASKDETNLSGFINEKEDTALIMFTSGSTSKPKGVMLTHYNLMYNTNSIIEYLK
LTKNDRVEVVLPFYYCYGTSLLNTHFRCGGSLVINNRFMFPETVIEDIKKYNCTGFAGVP
STYQILLRMTSIKTAKLPSLRYVTQAGGRLPEVFISELCEALEGTDVYIMYGQTEATARL
SYLPPEQIKNKLGSIGCGIPRTELVVLNREGNPTSVGEVGEIAARGGNIMKGYFNDQEET
KKVLKNGLLYTGDLAFRDEDGYIFVVSREKNIIKCAGNRISPKEIENTICSIKEVVECAV
IGVEDDILGEAIKAFVVLKDKNSSIDDKYIIDYCSSVLPRYKLPKYVQFLSQLPKNSSGK
VLFAKLKDM
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgacttttactgattatgtttttgaagagtttaaagattcagataaaatagcagtaata
gataaaaataaaataagttatagggaaatttatgggggcgtaaattatgtaacttattta
ttacaggaaaatggatgttcaaaagaaaatagtgtacttgttatttcagacaattctgtt
ttttttataaaaacttattttggaataatcaaaaatgggagtatatgtgtccctgtaaac
cccaccatatctgaaaacgatatgaggtatattatggatattttaaaaataaaaatagta
ttttgccagaaaaaatatagaaataaagtagataagatagtctgtagggacaccatggta
tatagtgaggaaagtatttgggcaagtaaagatgaaactaatttaagcggctttataaat
gaaaaagaagatacggcacttattatgtttacatcaggctctacttcaaaaccaaagggg
gtaatgcttactcattataatctcatgtacaataccaattccataatagagtatttgaaa
ttgactaaaaatgacagagtggaagtggtacttcctttttactattgctatggaacatct
cttttgaacacacattttagatgtggtggaagccttgtaataaataatagatttatgttt
cctgaaacagttatagaagatataaaaaaatataattgcactggttttgcgggagtgcca
agtacctatcagatattacttagaatgaccagtattaagacagccaagctaccttcacta
aggtatgtaacccaggcaggcggcaggcttccagaagtattcatatcggaactatgtgaa
gcacttgaaggaactgacgtatatattatgtatggacaaactgaggctacagctagattg
tcatatctgcctccagagcagattaaaaataaattgggctccataggatgtggtattccg
agaacagagcttgtggtattaaatagagaaggaaatcctacctctgtgggagaggtggga
gaaatagctgcaagaggcggaaatataatgaagggatattttaatgaccaggaagaaacc
aaaaaggtgctgaaaaatggtcttttgtacacgggagatttagcttttagggatgaagat
ggatatatatttgtggtttccagagaaaaaaatataataaagtgtgcaggaaatagaata
agtcctaaggagattgaaaatactatatgcagcataaaagaggtggttgaatgtgctgtt
ataggagtagaggatgatattctaggggaggctataaaggcttttgtggttttaaaagat
aaaaattcttctatagatgacaagtatataattgactattgttcttcagtattaccaaga
tataagttgcctaaatatgttcagtttttatcacagcttcccaaaaattcttcgggaaaa
gtattatttgcaaaattgaaagacatgtaa
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