Clostridium kluyveri NBRC 12016: CKR_3143
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Entry
CKR_3143 CDS
T00832
Name
(GenBank) hypothetical protein
KO
K06958
RNase adapter protein RapZ
Organism
ckr
Clostridium kluyveri NBRC 12016
Brite
KEGG Orthology (KO) [BR:
ckr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ckr03019
]
CKR_3143
Messenger RNA biogenesis [BR:
ckr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
CKR_3143
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapZ-like_N
PapZ_C
AAA_18
AAA_33
AAA_22
AAA_24
AAA_28
Spb1_C
Motif
Other DBs
NCBI-ProteinID:
BAH08194
UniProt:
B9DWV1
LinkDB
All DBs
Position
complement(3544639..3545520)
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AA seq
293 aa
AA seq
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MRFVIVTGLSGAGKTQAIRNLEDLGFFCVDNLPPTLIPKFAEACYQTDGKIDKIALVIDI
RGGQFFDDIFESLNYLQKQGYKYEILFLDASDEVLIKRFKESRRKHPLAPDGRILNGILM
ERSRLREIKDRSDNIIDTSKLATRELREEITRIYSEEGQMETQLIVTVLSFGFKYGIPVD
SDLVFDVRFLPNPFYIPELKNHSGRDKIVVDYIMDFKETVKFIDKLEDMLEFLIPNYLKE
GKRQLIVSIGCTGGRHRSVTIANTIYNRLKDNGHRVNIDHRDIEEDIKGGKKL
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
gtgagatttgttatagtaacaggattgtctggagcagggaaaactcaagctataagaaat
ttagaagatttaggatttttttgtgtagataatttaccccctacactaatacctaaattt
gcagaggcctgttatcaaactgatggaaaaattgacaagatagctcttgttatagatata
aggggaggacagttttttgatgatatatttgaaagcttaaattatctacaaaaacaagga
tataaatatgaaatattatttttagatgcttcagatgaagtactgattaaaagatttaag
gaatctagaagaaaacaccctctggcacctgatggcagaatcttaaatggaatacttatg
gaaagaagtagacttagagaaataaaagatagatcagataacataatagatacatctaaa
ctggcaacaagagaactcagagaagagataacgaggatatattccgaagaaggccaaatg
gagactcaattgatagttactgtgctttcttttggatttaaatatggtatacctgttgat
tcggatttggtatttgatgtgagatttttacctaatcctttctatattcctgaacttaaa
aatcattccggcagagataaaatcgtagttgactatataatggactttaaggaaactgtt
aagtttatagataaattggaggatatgcttgaatttctaataccaaattatttgaaggaa
ggtaaaagacagcttattgtatctataggatgtacaggggggagacaccgttctgtgact
attgcaaatacgatttataacagattaaaagataatggccatagagtgaatatagaccac
agggatatagaagaagatattaaaggtggtaaaaagctatga
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