Clostridium kluyveri NBRC 12016: CKR_3330
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Entry
CKR_3330 CDS
T00832
Name
(GenBank) hypothetical protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ckr
Clostridium kluyveri NBRC 12016
Pathway
ckr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ckr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CKR_3330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ckr03400
]
CKR_3330
Enzymes [BR:
ckr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
CKR_3330
DNA repair and recombination proteins [BR:
ckr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CKR_3330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
BAH08381
UniProt:
B9DXD8
LinkDB
All DBs
Position
complement(3753687..3754277)
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AA seq
196 aa
AA seq
DB search
MRLKLLKWRELYEQCINCNKCGLGDSRINMVFGDGNPKADLVFIGEAPGADEDRIGLPFV
GKAGKLLTKALESLDLYRKKDYYICNICKCRPKNNRTPYEDEEKACLPYLRNQVALIKPK
IIVCLGATAMGCILGKDWRITRDRGKWVERKGFYITATFHPSAILRDENKKPLFWQDLKN
IRRKYEEIFEIKNIDT
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
gtgagattaaagttgttaaagtggagagagttatatgaacaatgtataaattgtaataaa
tgtggtttaggtgatagtagaataaatatggtttttggagatggaaatcctaaagcagat
ttagtgtttataggagaagcgcccggagcagatgaggatagaattggattaccttttgtg
ggaaaggcaggaaaacttttgactaaggcccttgaatcactggatttgtacaggaaaaag
gattattatatatgtaatatttgcaaatgtaggcctaaaaataatagaactccttatgaa
gatgaggaaaaagcatgtcttccttatttaagaaatcaggtagcacttataaaacctaaa
ataatagtttgtcttggagctactgcaatgggctgtatattgggtaaagattggagaatt
acacgagatagaggaaaatgggttgaaagaaaaggattttatataactgctacctttcat
ccttctgctatattgagagatgagaataaaaaacctttattttggcaagacttaaaaaat
ataagaagaaaatatgaagaaatttttgaaataaaaaatattgacacataa
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