Clostridium kluyveri NBRC 12016: CKR_3344
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Entry
CKR_3344 CDS
T00832
Name
(GenBank) hypothetical protein
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
ckr
Clostridium kluyveri NBRC 12016
Pathway
ckr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ckr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CKR_3344
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ckr03019
]
CKR_3344
Enzymes [BR:
ckr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
CKR_3344
Messenger RNA biogenesis [BR:
ckr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
CKR_3344
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
HD
RFC1
Motif
Other DBs
NCBI-ProteinID:
BAH08395
UniProt:
B9DXF2
LinkDB
All DBs
Position
complement(3765859..3767262)
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AA seq
467 aa
AA seq
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MMNLNYIKKFIYDAKDTINEVEGELYLVGGYIRNKLMNIASQPKDADFVFNGDIHEFISK
LQNKGYKFFPIKESVSIYRCIKDKNKIDVSLMKGNSIEEDLENRDFTINALALRFSDNKI
IDPFYGRKAIQSRILKNVTDRSLEEDPCRILRGIRFCITLGMHFNLETENNIEKFKDKIM
DLPKERVFNEFMLIIENDKYGRAFEILDNYGILKNIVPYIEESKTIGKCKYHVEDVFTHL
NLTYGVFKDILNGSINLQNLDISKLDTKMGEFTLKEYAALACFLHDIGKYEVYKKVGNKV
SFHKHEIKGAAICRDFCNYMKLSKKAVKYIENIVEGHMYPLNIFTNKTVNRKKAFYKFFN
KYDGYVVEIIITAFCDNCATKMLLEIKDKNLGFKEFIEQMLKEYKLYCNIRDNKILSGEE
VVEVLVKSGPQVKTAIESIHRLRYLGEIITREDALNYLKSQTSKIYI
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
gtgatgaatttgaattatataaaaaaatttatttatgatgcaaaagatacaattaatgaa
gtagaaggagaattatatttagtaggaggatatataagaaataaattgatgaatatagcc
tctcagcctaaagatgcagattttgtgtttaatggggatattcatgaatttataagtaag
cttcaaaataaaggatataaatttttccctataaaagaaagtgtatctatatatagatgt
ataaaagataaaaataaaatagacgtatcccttatgaaaggaaattccattgaagaagat
ttagaaaatagggattttactattaatgctttagcgctaagatttagtgataataaaata
atagatcctttttacggaagaaaagctattcaaagtaggatattaaaaaatgttactgat
aggagcttagaagaggatccctgtaggatattaagaggtatcagattttgtataactctg
ggaatgcattttaatttagagactgagaataatattgaaaaatttaaagataaaataatg
gatttgcctaaagaaagagtttttaatgagtttatgcttataatagaaaacgataaatat
ggaagagcttttgaaatccttgataattacggaatattaaagaatatagttccctatata
gaagaatctaaaactataggaaaatgtaaatatcatgtggaagatgtatttacccacttg
aatttaacttatggagtatttaaggatattttaaatggcagtataaatcttcaaaattta
gatattagtaagttggatactaaaatgggtgaatttacattaaaagaatatgcagcttta
gcatgctttttacacgatataggtaaatatgaagtatataaaaaagtaggaaataaagta
agttttcacaagcatgaaataaaaggggcagccatatgtagagatttctgcaattacatg
aagttatctaaaaaggcagtaaaatatatagaaaatatagtagaagggcacatgtatcca
ttaaacatttttactaataaaaccgtgaatagaaaaaaagctttttataaattttttaat
aaatatgatggatatgtagtagaaataattattactgcattttgtgataattgtgctacc
aaaatgttattggagataaaagataaaaacttagggtttaaagaatttattgagcagatg
ttaaaagaatataaattatattgtaatatacgagataataaaattctaagtggagaagag
gttgttgaagtattggttaaatcgggacctcaggtaaaaactgcaattgaaagtattcat
agacttagatatttaggagaaataattactagagaagatgcattaaattatttaaaatca
cagacttctaaaatttatatttaa
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