Clostridium kluyveri NBRC 12016: CKR_3354
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Entry
CKR_3354 CDS
T00832
Name
(GenBank) hypothetical protein
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
ckr
Clostridium kluyveri NBRC 12016
Pathway
ckr03030
DNA replication
ckr03430
Mismatch repair
ckr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ckr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CKR_3354
03430 Mismatch repair
CKR_3354
03440 Homologous recombination
CKR_3354
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ckr03032
]
CKR_3354
03400 DNA repair and recombination proteins [BR:
ckr03400
]
CKR_3354
Enzymes [BR:
ckr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CKR_3354
DNA replication proteins [BR:
ckr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CKR_3354
DNA repair and recombination proteins [BR:
ckr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CKR_3354
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
AAA
DNA_pol3_delta
nSTAND3
RNA_helicase
Motif
Other DBs
NCBI-ProteinID:
BAH08405
UniProt:
B9DXG2
LinkDB
All DBs
Position
complement(3774419..3775363)
Genome browser
AA seq
314 aa
AA seq
DB search
MSFYRIIGHDMIKSQIENSIKLNRLSHASIFVGEDGLGKSLFAEELAIKILGKNEIKRYV
DIIELKLFKNKKSIGIEEIKYIIEEINKKPYEGDKKVIILYNSDKITETAQNAVLKTIEE
PPKGSFIILLCEKLDGILDTVKSRCQIYKLNRLNSKDMKKFLNNKFPGLYEQELNSIMAF
SDGIPGRAEKFISSSVLKEIRNITIKIFRKLYDEDINITLEFPNYLFKEKDNWEEILTCM
LSYIRDVLIYKETGNSDLIINRDKFQELKAIGEMFSFNKLNAIIDIIGSIREKIDKNVNP
TLVFDSMLMKMQEV
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
gtgagtttttataggataataggtcatgatatgataaaatctcagatagaaaattctata
aagctgaatagactttctcatgccagtatttttgtaggagaagatggacttggaaagagt
ttgtttgctgaagaattagccataaaaatactaggtaaaaatgaaattaaacgatatgta
gatataatagaacttaagttatttaaaaataaaaaatctattggtatagaagaaataaaa
tatataatagaggagattaataaaaaaccatatgaaggtgacaaaaaagtaataatacta
tataattctgataaaattacggaaactgctcagaatgcagtattgaaaactatagaagaa
ccaccaaaaggaagttttattatactattgtgtgagaagctggatggaattttagataca
gtaaaatccagatgtcagatatataaacttaataggctaaattcaaaagatatgaaaaaa
tttttgaataataaattccctggattgtatgaacaagaattaaattctattatggctttt
agtgatggtatacctggaagagcagaaaaatttatttcaagttcagttttaaaagaaata
aggaatataactataaaaatatttaggaaattatatgacgaagatataaatattacttta
gaatttcctaattacttatttaaagaaaaagataactgggaagagatacttacctgtatg
ttgtcttatatacgtgatgttctcatatataaggaaacaggtaatagtgatttgattata
aatagggataagtttcaagagctaaaagctataggagaaatgttttcattcaataaatta
aatgctattattgatattataggaagtattagggaaaaaatagataaaaatgtaaatcca
actttggtttttgattctatgctgatgaaaatgcaggaggtataa
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