Chitinimonas koreensis: H9L41_00235
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Entry
H9L41_00235 CDS
T08620
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cks
Chitinimonas koreensis
Pathway
cks03420
Nucleotide excision repair
cks03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cks00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
H9L41_00235
03430 Mismatch repair
H9L41_00235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cks03400
]
H9L41_00235
Enzymes [BR:
cks01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
H9L41_00235
DNA repair and recombination proteins [BR:
cks03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
H9L41_00235
MMR (mismatch excision repair)
Other MMR factors
H9L41_00235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_12
AAA_30
Viral_helicase1
AAA_22
AAA_11
DUF1266
Motif
Other DBs
NCBI-ProteinID:
QNM96827
LinkDB
All DBs
Position
complement(52996..55167)
Genome browser
AA seq
723 aa
AA seq
DB search
MSSSLLAGLNPEQLAAVTLPAVPALILAGAGSGKTRVLTTRIAWLLSTGQASQHAILAVT
FTNKAAKEMLTRISAQLPVNARSLWVGTFHGLCNRLLRMHWRDAGLPEAFQIMDSADQLA
AIKRLLKALNVDDEKYPPRDLMHFINANKEEGRRPPEVEAWDDYTRMLRQLYEEYERQCR
REGVVDFAELLLRSYELLRDNAALRGHYQARFRYILVDEFQDTNRLQYKWLKLLAGKDDY
AGLMGRMAGDAAQAPTAAVFAVGDDDQSIYAFRGANVGNMRDFERDFKVDTIIRLEQNYR
SHGNILDAANALISHNRGRLGKNLWTEESAGDPIRVFEAATDFEEAQFVVDEVRQLHREG
TALSDMALLYRSNAQSRVLEHALFQAGLSYRVYGGLRFFERQEIKHALAYLRLINNPDDD
NALLRVINFPARGIGNRTLEILGETARGTGASIWQAACSGGAGRSAAAVGKFIQLIEGMR
AQADGLTLPELVQLAIEQSGLIEHYRLDKEGQDRLENLEQLVAAADRFVQENEDSVVDFL
TQASLEAGEHEAAPGQDALQLMTVHAAKGLEFHAVFLTGVEEGLFPHDNSLNDPESLEEE
RRLAYVAITRARRRLYISLAQSRMLHGQTRFSLASRFLSEIPQDLLKWLNRGYAPAAMPS
RPAEKKAPEHGLRVGASVEHPKFGRGVVVDYDGSGKNANVQVNFGAAGVKWLALEYARLT
LVN
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcttcgctgctcgccggactcaatcccgaacaactcgccgccgtcacgctgccc
gcagtgcccgccctgatcctggccggcgccggctcgggcaagacgcgcgtgctgaccacc
cgcatcgcctggctgctgtcgaccggccaggccagccagcatgccatcctggcggtcacc
ttcaccaacaaggcggccaaggagatgctgacgcgcatctcggcccagctgccggtcaac
gcgcgctcgctgtgggtcggcaccttccacggcctgtgcaaccgcctcttgcgcatgcac
tggcgcgacgccggcctgcccgaggcgttccagatcatggacagcgccgaccagctggcc
gcgatcaagcgtctcctgaaggcgctcaacgtcgacgacgagaaatacccgccgcgcgac
ctgatgcacttcatcaacgccaacaaggaagagggccgccggccgcccgaggtcgaggcc
tgggacgactacacccgcatgctgcgccagctgtacgaggagtacgaacggcagtgccgc
cgcgagggcgtggtcgatttcgccgaactgctgctgcgcagctacgagctgctgcgcgac
aacgccgcgctgcgcggccactaccaggcgcgcttccgctacatcctggtcgacgagttc
caggacaccaaccgcctgcagtacaagtggctcaagctcctggccggcaaggacgactac
gccgggctgatgggccggatggccggcgacgccgcccaggcgccgaccgccgcggtgttc
gcggtcggcgacgacgaccagtcgatctacgccttccgcggcgccaacgtcggcaacatg
cgcgacttcgaacgcgacttcaaggtcgacaccatcatccggctggagcagaactaccgc
tcgcacggcaacatcctcgacgccgccaacgcgctgatctcgcacaaccgcggccggctc
ggcaagaacctgtggaccgaggagagcgccggcgacccgatccgggtgttcgaggccgcc
accgacttcgaggaggcgcagttcgtggtcgacgaggtgcgccagctgcaccgcgaaggc
acggcgctgtcggacatggcgctgctgtaccgctccaacgcccagtcgcgggtgctcgaa
cacgcgctgttccaggccggcctgtcctaccgcgtctacggcggcctgcgcttcttcgaa
cggcaggagatcaagcacgcgctggcctacctgcggctgatcaacaacccggacgacgac
aacgcgctcctgcgcgtcatcaacttcccggcccgcggcatcggcaaccgcacgctggag
atcctcggcgagaccgcccgcggcaccggcgccagcatctggcaggcggcctgctcgggc
ggcgccggccgcagcgccgcagcggtcggcaagttcatccagctgatcgagggcatgcgc
gcccaggccgacggcctgaccctgcccgagctggtccagctggcgatcgagcagtcgggc
ctgatcgagcactaccggctcgacaaggaaggccaggaccggctggagaacctcgaacag
ctggtcgccgcggccgaccgcttcgtgcaggagaacgaggacagcgtggtcgacttcctg
acccaggccagcctcgaggccggcgagcacgaggcggcgccgggccaggacgcgctgcag
ctgatgacggtgcacgccgccaaggggttggaattccacgcggtattcctgaccggcgtc
gaggaggggctgttcccgcacgacaacagcctgaacgaccccgagtcgctcgaggaagaa
cgccggctggcctatgtcgcgatcacccgcgcgcgccgccggctctacatcagcctggcg
cagagccgcatgctgcacggccagacgcgcttctcgctggcctcgcgcttcctgtccgag
attccgcaggatctgctgaaatggctgaaccgcggctacgcgccggcggcgatgccgagc
cggccggccgagaagaaggcgcccgagcacggcctgcgcgtcggcgccagcgtcgagcat
ccgaagttcggccgcggcgtggtggtcgactacgacggcagcggcaagaatgccaacgtg
caggtgaacttcggcgccgccggggtgaagtggcttgcgcttgaatatgcgcgacttaca
ctggtgaattga
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